Factsheet for HORVU6Hr1G068670.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G091010.1
HORVU3Hr1G057690.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G78140.1	HORVU1Hr1G091010.1	AT3G18570.1	21798944
AT1G78140.1	HORVU3Hr1G057690.1	AT3G18570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G078410.1	Barley	plastid	89.11	92.63
TraesCS6D01G243900.1	Wheat	plastid	80.0	87.05
TraesCS6B01G298300.1	Wheat	plastid	78.73	86.39
TraesCS6A01G271200.2	Wheat	plastid	78.73	86.39
EES14971	Sorghum	plastid	60.51	67.9
KRH53082	Soybean	cytosol, mitochondrion	34.94	65.4
Os08t0411200-01	Rice	mitochondrion	57.97	63.97
GSMUA_Achr4P01800_001	Banana	mitochondrion	50.63	56.34
Zm00001d032301_P008	Maize	plastid	33.16	55.51
CDY26853	Canola	plastid	47.34	54.84
Bra008348.1-P	Field mustard	plastid	47.09	54.55
CDY14625	Canola	plastid	46.58	54.28
VIT_18s0001g05440.t01	Wine grape	mitochondrion	47.34	53.43
AT1G78140.1	Thale cress	plastid	46.84	52.11
Bra015626.1-P	Field mustard	plastid	45.32	51.44
CDX88421	Canola	plastid	45.57	50.99
KRH62365	Soybean	plastid	45.32	50.85
CDX87473	Canola	golgi, mitochondrion, plastid	45.06	50.0
HORVU7Hr1G114960.13	Barley	cytosol, plastid	41.01	40.0

Protein Annotations

EnsemblPlants:HORVU6Hr1G068670.1	EnsemblPlantsGene:HORVU6Hr1G068670	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	InterPro:Methyltransf_11	InterPro:SAM-dependent_MTases
PANTHER:PTHR43591	PANTHER:PTHR43591:SF19	PFAM:PF08241	SEG:seg	SUPFAM:SSF53335	UniParc:UPI000B48313A
UniProt:A0A287UJE1	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:476085934..476089762

Molecular Weight (calculated)

42812.4 Da

IEP (calculated)

7.336

GRAVY (calculated)

0.102

Length

395 amino acids

Sequence
(BLAST)

001: LFATCWNPGS APGRTPLLSD FISIFAYSSP THHPHLDSTM AAIRSAPISA AAIVAPRGFG RRRRLVPCLA APAGGASGVT ASASRKMLPR SALHASASTT
101: GAPDRDEAAA ESLVRAELSK LACPICYYPL VSSIDHRSPP SESDSSLECP TCKKLYSKDD YWDLTVAVGS TEYSETMPAA TELFRTQLVS FLYERGWRQN
201: FIWGGFPGLE KEFEMAKDYL KPTSGGIIID ASCGSGLFSR LFVKSGLYCL VVALDFSENM LKQCKEFIKQ ENISDERLVL VRADISRLPF VSGSIDALHA
301: GAAIHCWPSP ACAIAEISRV LRPGGIFVGS TFIADVLPPV IPLLRIGRPY IDQITGNNTF LSELELEDLC RACGLVNFTF VRNGFYIMFS ATKAS

Best Arabidopsis Sequence Match ( AT1G78140.1 )
(BLAST)

001: MPMTVVSGRF STALLPTCFS LSRLHSVKYA AQRRVVFVSR SAHASSASVS VETNSNSNVD FVIEKKDKNR GEKKILACPI CYNSLAWISQ PNGLIESAAS
101: GIQVQCNTCK RSYSGNETHL DLAVASGSKR YSEPMPLSTE LFRTPLVSFL YERGWRQNFI WGGFPGPEKE FEMAKAYLKP VLGGNIIDAS CGSGMFSRLF
201: TRSDLFSLVI ALDYSENMLR QCYELLNKEE NFPNKEKLVL VRADIARLPF LSGSVDAVHA GAALHCWPSP SSAVAEISRV LRPGGVFVAT TFIYDGPFSF
301: IPFLKNLRQE IMRYSGSHIF LNERELEDIC KACGLVNFTR VRNGPFIMLS ATKPS

Arabidopsis Description

Uncharacterized methyltransferase At1g78140, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LBV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.