Factsheet for HORVU2Hr1G078410.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G091010.1
HORVU3Hr1G057690.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G78140.1	HORVU1Hr1G091010.1	AT3G18570.1	21798944
AT1G78140.1	HORVU3Hr1G057690.1	AT3G18570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G243900.1	Wheat	plastid	86.32	90.36
TraesCS6B01G298300.1	Wheat	plastid	85.0	89.72
HORVU6Hr1G068670.1	Barley	plastid	92.63	89.11
TraesCS6A01G271200.2	Wheat	plastid	83.68	88.33
EES14971	Sorghum	plastid	64.21	69.32
KRH53082	Soybean	cytosol, mitochondrion	36.05	64.93
Os08t0411200-01	Rice	mitochondrion	61.05	64.8
Zm00001d032301_P008	Maize	plastid	36.05	58.05
GSMUA_Achr4P01800_001	Banana	mitochondrion	51.84	55.49
CDY26853	Canola	plastid	49.74	55.43
Bra008348.1-P	Field mustard	plastid	49.47	55.13
CDY14625	Canola	plastid	48.95	54.87
VIT_18s0001g05440.t01	Wine grape	mitochondrion	48.95	53.14
AT1G78140.1	Thale cress	plastid	49.21	52.68
Bra015626.1-P	Field mustard	plastid	47.89	52.3
CDX88421	Canola	plastid	47.63	51.27
CDX87473	Canola	golgi, mitochondrion, plastid	47.63	50.84
KRH62365	Soybean	plastid	46.05	49.72
HORVU7Hr1G114960.13	Barley	cytosol, plastid	41.84	39.26

Protein Annotations

EnsemblPlants:HORVU2Hr1G078410.1	EnsemblPlantsGene:HORVU2Hr1G078410	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	InterPro:Methyltransf_11	InterPro:SAM-dependent_MTases
PANTHER:PTHR43591	PANTHER:PTHR43591:SF19	PFAM:PF08241	SEG:seg	SUPFAM:SSF53335	UniParc:UPI000B48163E
UniProt:A0A287IJZ4	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:568009040..568012549

Molecular Weight (calculated)

41324.6 Da

IEP (calculated)

6.834

GRAVY (calculated)

0.104

Length

380 amino acids

Sequence
(BLAST)

001: PLLSDFISIF AYSSPTHHPH LDSTMAAIRS APISAAAIVA PRGFGRRRRL VPCLAAPAGG ASGVTASASR KMLPRSALHA SASTTGAPDR DEAAAESLVR
101: AELSKLACPI CYYPLVSSID HRSPPSESDS SLECPTCKKL YSKDDYWDLT VAVGSTEYSE TMPAATELFR TQLVSFLYER GWRQNFIWGG FPGLEKEFEM
201: AKDYLKPTSG GIIIDASCGS GLFSRLFVKS ELYCLVVALD FSENMLKQCK EFIKQENISD ERLVLVRADI SRLPFVSGSI DALHAGAAIH CWPSPACAIA
301: EISRVLRPGG IFVGSTFIAD VLPPVIPLLR IGRPYIDQIT GNNTFLSELE LEDLCRACGL VNFTFVRNGF YIMFSATKAS

Best Arabidopsis Sequence Match ( AT1G78140.1 )
(BLAST)

001: MPMTVVSGRF STALLPTCFS LSRLHSVKYA AQRRVVFVSR SAHASSASVS VETNSNSNVD FVIEKKDKNR GEKKILACPI CYNSLAWISQ PNGLIESAAS
101: GIQVQCNTCK RSYSGNETHL DLAVASGSKR YSEPMPLSTE LFRTPLVSFL YERGWRQNFI WGGFPGPEKE FEMAKAYLKP VLGGNIIDAS CGSGMFSRLF
201: TRSDLFSLVI ALDYSENMLR QCYELLNKEE NFPNKEKLVL VRADIARLPF LSGSVDAVHA GAALHCWPSP SSAVAEISRV LRPGGVFVAT TFIYDGPFSF
301: IPFLKNLRQE IMRYSGSHIF LNERELEDIC KACGLVNFTR VRNGPFIMLS ATKPS

Arabidopsis Description

Uncharacterized methyltransferase At1g78140, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LBV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.