Factsheet for Os08t0411200-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0643900-01
Os05t0576700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G78140.1	Os01t0643900-01	AT3G18570.1	21798944
AT1G78140.1	Os05t0576700-01	AT3G18570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14971	Sorghum	plastid	69.27	70.45
TraesCS6D01G243900.1	Wheat	plastid	68.72	67.77
TraesCS6B01G298300.1	Wheat	plastid	67.6	67.22
TraesCS6A01G271200.2	Wheat	plastid	66.2	65.83
KRH53082	Soybean	cytosol, mitochondrion	36.87	62.56
HORVU2Hr1G078410.1	Barley	plastid	64.8	61.05
Zm00001d032301_P008	Maize	plastid	38.83	58.9
HORVU6Hr1G068670.1	Barley	plastid	63.97	57.97
CDY14625	Canola	plastid	51.4	54.28
CDY26853	Canola	plastid	51.68	54.25
Bra008348.1-P	Field mustard	plastid	51.68	54.25
AT1G78140.1	Thale cress	plastid	52.79	53.24
Bra015626.1-P	Field mustard	plastid	50.56	52.01
VIT_18s0001g05440.t01	Wine grape	mitochondrion	50.56	51.71
CDX88421	Canola	plastid	50.56	51.27
GSMUA_Achr4P01800_001	Banana	mitochondrion	50.28	50.7
CDX87473	Canola	golgi, mitochondrion, plastid	50.0	50.28
KRH62365	Soybean	plastid	46.09	46.88
Os06t0646000-01	Rice	plastid	44.13	45.8

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	EntrezGene:4345551	EMBL:AK120890	ProteinID:BAF23700.1	ProteinID:BAT05401.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009507	GO:GO:0009536	GO:GO:0010287
GO:GO:0016740	GO:GO:0032259	InterPro:Methyltransf_11	EnsemblPlantsGene:Os08g0411200	EnsemblPlants:Os08t0411200-01	PFAM:PF08241
PANTHER:PTHR43591	PANTHER:PTHR43591:SF19	UniProt:Q0J5R5	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0000DD9511
RefSeq:XP_015648802.1	SEG:seg	:	:	:	:

Description

Methyltransferase type 11 domain containing protein. (Os08t0411200-01)

Coordinates

chr8:-:19672758..19676628

Molecular Weight (calculated)

38747.1 Da

IEP (calculated)

7.499

GRAVY (calculated)

0.060

Length

358 amino acids

Sequence
(BLAST)

001: MWSRCSAGSA VALCGGRGGH RLLSCAAARR RAPGASASAK GIPRSALRAS VTPEFVTAAP DEAVEESSVE REPAAENKLR KLACPICYYP LISSSDQSAP
101: VSAASSSSLE CSTCKKFYPN RGDYWDMTVA VGSTEYSEST TVTTEVFRTP LVSFLYERGW RQNFIWSGFP GLEREFEMAQ TYLKPTTGGI IVDASCGSGL
201: FSRLFVKSEL YSLVVALDFS ENMLKQCNEY VKQENISDKT LALARADISR LPFVSGSIDA VHAAAAIHCW PSPACAVAEI SRVLRPGGVF VASTFVADIL
301: PPAVPVLRIG RPYISQFTGS NIFLSEAEFE DLCRACGLID FKFVRNGFYI MFSATKAS

Best Arabidopsis Sequence Match ( AT1G78140.1 )
(BLAST)

001: MPMTVVSGRF STALLPTCFS LSRLHSVKYA AQRRVVFVSR SAHASSASVS VETNSNSNVD FVIEKKDKNR GEKKILACPI CYNSLAWISQ PNGLIESAAS
101: GIQVQCNTCK RSYSGNETHL DLAVASGSKR YSEPMPLSTE LFRTPLVSFL YERGWRQNFI WGGFPGPEKE FEMAKAYLKP VLGGNIIDAS CGSGMFSRLF
201: TRSDLFSLVI ALDYSENMLR QCYELLNKEE NFPNKEKLVL VRADIARLPF LSGSVDAVHA GAALHCWPSP SSAVAEISRV LRPGGVFVAT TFIYDGPFSF
301: IPFLKNLRQE IMRYSGSHIF LNERELEDIC KACGLVNFTR VRNGPFIMLS ATKPS

Arabidopsis Description

Uncharacterized methyltransferase At1g78140, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LBV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.