Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 3
- plasma membrane 3
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
27992503
|
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19991 | Sorghum | golgi, mitochondrion, peroxisome, plastid | 86.13 | 89.22 |
| Zm00001d009648_P001 | Maize | plasma membrane | 74.57 | 82.17 |
| GSMUA_Achr3P26330_001 | Banana | plastid | 63.01 | 65.66 |
| KRH03819 | Soybean | endoplasmic reticulum, nucleus | 53.18 | 58.97 |
| Solyc03g119820.1.1 | Tomato | plastid | 56.07 | 58.79 |
| KRH56699 | Soybean | endoplasmic reticulum | 54.91 | 58.28 |
| GSMUA_Achr1P11880_001 | Banana | plastid | 55.49 | 57.14 |
| VIT_17s0000g04210.t01 | Wine grape | plastid | 53.18 | 57.14 |
| PGSC0003DMT400014323 | Potato | plastid | 55.49 | 57.14 |
| Os01t0643900-01 | Rice | golgi, nucleus, plasma membrane | 51.45 | 52.98 |
| KRH16003 | Soybean | golgi, plasma membrane, vacuole | 41.62 | 49.32 |
| PGSC0003DMT400010423 | Potato | golgi, mitochondrion, plasma membrane, plastid | 42.2 | 48.99 |
| Bra018770.1-P | Field mustard | plastid | 44.51 | 47.83 |
| Solyc06g069260.1.1 | Tomato | plasma membrane, plastid | 42.2 | 47.71 |
| AT3G18570.1 | Thale cress | golgi, peroxisome, plasma membrane, plastid | 43.93 | 45.78 |
| CDX92248 | Canola | golgi, plasma membrane, plastid, vacuole | 43.35 | 45.45 |
| Bra022333.1-P | Field mustard | golgi, plasma membrane, plastid, vacuole | 43.35 | 45.45 |
| CDX99345 | Canola | golgi, plasma membrane, plastid, vacuole | 43.35 | 45.45 |
| Bra014166.1-P | Field mustard | plastid | 43.35 | 45.18 |
| CDY06745 | Canola | plasma membrane | 42.2 | 44.51 |
| CDX95515 | Canola | plasma membrane | 42.2 | 44.51 |
| AT1G48990.1 | Thale cress | plastid | 43.35 | 44.38 |
| CDX82338 | Canola | golgi, plasma membrane, vacuole | 42.2 | 44.24 |
| Bra037577.1-P | Field mustard | golgi, plasma membrane, plastid | 41.62 | 43.9 |
| CDY18527 | Canola | golgi, plasma membrane, plastid | 41.62 | 43.9 |
| CDX75969 | Canola | cytosol, golgi, plasma membrane, plastid | 41.04 | 43.03 |
| Bra001711.1-P | Field mustard | golgi, plasma membrane, vacuole | 41.62 | 40.91 |
| CDX77269 | Canola | endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid | 32.95 | 40.71 |
| KRH54801 | Soybean | plasma membrane | 41.04 | 37.17 |
| Os04t0546500-01 | Rice | plastid | 27.75 | 32.43 |
| Os09t0324000-02 | Rice | plastid | 28.32 | 31.01 |
| Os03t0699000-01 | Rice | plastid | 26.01 | 26.16 |
Protein Annotations
| EntrezGene:4339696 | MapMan:5.9.2 | ProteinID:AAT39147.1 | EMBL:AK063599 | EMBL:AK108377 | ProteinID:BAF18317.1 |
| ProteinID:BAS95481.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
| GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019915 | InterPro:Oleosin | EnsemblPlantsGene:Os05g0576700 |
| EnsemblPlants:Os05t0576700-01 | PFAM:PF01277 | PANTHER:PTHR33203 | PANTHER:PTHR33203:SF4 | UniProt:Q6L5F8 | TMHMM:TMhelix |
| UniParc:UPI0000378039 | RefSeq:XP_015637401.1 | SEG:seg | : | : | : |
Description
Oleosin family protein. (Os05t0576700-01)
Coordinates
chr5:-:28716494..28717779
Molecular Weight (calculated)
18099.8 Da
IEP (calculated)
9.928
GRAVY (calculated)
0.369
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MADRQQQHAH GEGRTAAQRL GYAPAASADS PSTTLLRRVQ THAPNSTQVV GFLTLAVSGA VLLLLTGLTL TGAVVALIFL GPIALLTSPI WVPVAVALFV
101: LAAAALSACA FVVVAVAAGT WMYRYFTGRH PVGADRVDYA RSRIADTASH VKDYAREYGG YLHSRAKDAA PGA
101: LAAAALSACA FVVVAVAAGT WMYRYFTGRH PVGADRVDYA RSRIADTASH VKDYAREYGG YLHSRAKDAA PGA
001: MAERFSSGEA QYWPNYGSTA TTTVSNSPIS SFFHQLRSHS PTSSQLFGFL ALFISTGILL FLLGVSVTAA VLGFIVFLPL IIISSPIWIP VFVVVGGFLT
101: VSGFLVGTVA LVSWTYRYFR GMHPVGSNQM DYARSRIYDT ASHVKDYARE YGGYFHGRAK DAAPGA
101: VSGFLVGTVA LVSWTYRYFR GMHPVGSNQM DYARSRIYDT ASHVKDYARE YGGYFHGRAK DAAPGA
Arabidopsis Description
Oleosin family protein [Source:UniProtKB/TrEMBL;Acc:Q9LII2]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.