Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 1
- mitochondrion 1
- golgi 2
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g119820.1.1 | Tomato | plastid | 70.19 | 68.48 |
| PGSC0003DMT400014323 | Potato | plastid | 70.19 | 67.26 |
| KRH03819 | Soybean | endoplasmic reticulum, nucleus | 64.6 | 66.67 |
| KRH56699 | Soybean | endoplasmic reticulum | 66.46 | 65.64 |
| GSMUA_Achr3P26330_001 | Banana | plastid | 63.98 | 62.05 |
| KRH16003 | Soybean | golgi, plasma membrane, vacuole | 53.42 | 58.9 |
| Zm00001d009648_P001 | Maize | plasma membrane | 54.04 | 55.41 |
| GSMUA_Achr1P11880_001 | Banana | plastid | 57.14 | 54.76 |
| EES19991 | Sorghum | golgi, mitochondrion, peroxisome, plastid | 56.52 | 54.49 |
| PGSC0003DMT400010423 | Potato | golgi, mitochondrion, plasma membrane, plastid | 50.31 | 54.36 |
| Os05t0576700-01 | Rice | plastid | 57.14 | 53.18 |
| Solyc06g069260.1.1 | Tomato | plasma membrane, plastid | 50.31 | 52.94 |
| Bra018770.1-P | Field mustard | plastid | 52.8 | 52.8 |
| AT1G48990.1 | Thale cress | plastid | 54.66 | 52.07 |
| AT3G18570.1 | Thale cress | golgi, peroxisome, plasma membrane, plastid | 53.42 | 51.81 |
| CDX92248 | Canola | golgi, plasma membrane, plastid, vacuole | 52.8 | 51.52 |
| Bra022333.1-P | Field mustard | golgi, plasma membrane, plastid, vacuole | 52.8 | 51.52 |
| TraesCS1B01G445100.1 | Wheat | plasma membrane | 53.42 | 51.5 |
| CDX99345 | Canola | golgi, plasma membrane, plastid, vacuole | 52.17 | 50.91 |
| TraesCS1D01G422600.1 | Wheat | plasma membrane | 52.8 | 50.9 |
| HORVU1Hr1G091010.1 | Barley | cytosol, golgi, plasma membrane | 52.8 | 50.6 |
| Bra014166.1-P | Field mustard | plastid | 51.55 | 50.0 |
| TraesCS1A01G415100.1 | Wheat | plasma membrane | 51.55 | 49.7 |
| CDX75969 | Canola | cytosol, golgi, plasma membrane, plastid | 50.31 | 49.09 |
| CDY06745 | Canola | plasma membrane | 49.07 | 48.17 |
| CDX95515 | Canola | plasma membrane | 49.07 | 48.17 |
| CDX82338 | Canola | golgi, plasma membrane, vacuole | 49.07 | 47.88 |
| Bra037577.1-P | Field mustard | golgi, plasma membrane, plastid | 47.2 | 46.34 |
| CDY18527 | Canola | golgi, plasma membrane, plastid | 47.2 | 46.34 |
| CDX77269 | Canola | endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid | 39.75 | 45.71 |
| VIT_04s0008g00540.t01 | Wine grape | plasma membrane | 40.99 | 45.21 |
| Bra001711.1-P | Field mustard | golgi, plasma membrane, vacuole | 48.45 | 44.32 |
| KRH54801 | Soybean | plasma membrane | 50.31 | 42.41 |
| Os01t0643900-01 | Rice | golgi, nucleus, plasma membrane | 39.13 | 37.5 |
| Zm00001d044080_P001 | Maize | plastid | 42.86 | 36.9 |
| VIT_17s0000g09000.t01 | Wine grape | golgi, plasma membrane, vacuole | 32.3 | 36.62 |
| OQU87227 | Sorghum | plastid | 43.48 | 36.27 |
| VIT_16s0013g00880.t01 | Wine grape | plasma membrane | 32.3 | 36.11 |
| VIT_02s0234g00110.t01 | Wine grape | plastid | 29.81 | 36.09 |
| VIT_14s0066g00700.t01 | Wine grape | golgi, plasma membrane, plastid, vacuole | 27.95 | 32.14 |
| HORVU3Hr1G057690.1 | Barley | plasma membrane | 27.95 | 29.03 |
| VIT_14s0066g00710.t01 | Wine grape | golgi, plasma membrane, plastid | 25.47 | 26.11 |
Protein Annotations
| EntrezGene:100244020 | wikigene:100244020 | MapMan:5.9.2 | ProteinID:CCB43190 | ProteinID:CCB43190.1 | UniProt:F6GTI1 |
| EMBL:FN594950 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
| GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019915 | EntrezGene:LOC100244020 | wikigene:LOC100244020 |
| InterPro:Oleosin | PFAM:PF01277 | PANTHER:PTHR33203 | PANTHER:PTHR33203:SF4 | TMHMM:TMhelix | UniParc:UPI00015C9D28 |
| ArrayExpress:VIT_17s0000g04210 | EnsemblPlantsGene:VIT_17s0000g04210 | EnsemblPlants:VIT_17s0000g04210.t01 | RefSeq:XP_002273242 | RefSeq:XP_002273242.1 | : |
Description
No Description!
Coordinates
chr17:-:4476609..4477378
Molecular Weight (calculated)
17321.1 Da
IEP (calculated)
10.174
GRAVY (calculated)
0.292
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MADRHSGSGQ TQRPPRPTPG SAFLRRLHDH APNSTQFIGF LALIVSGCIL LFLTGLTITA TVIGLIFFTP LILLSSPIWV PAGTVLFLAA AGFLSMCGFG
101: LAVLAGLSWI YKYFRGWNPP GSGRFDYARS RIADTASHVK DYAREYGGYL QSKVKDAAPG A
101: LAVLAGLSWI YKYFRGWNPP GSGRFDYARS RIADTASHVK DYAREYGGYL QSKVKDAAPG A
001: MAERFSSGEA QYWPNYGSTA TTTVSNSPIS SFFHQLRSHS PTSSQLFGFL ALFISTGILL FLLGVSVTAA VLGFIVFLPL IIISSPIWIP VFVVVGGFLT
101: VSGFLVGTVA LVSWTYRYFR GMHPVGSNQM DYARSRIYDT ASHVKDYARE YGGYFHGRAK DAAPGA
101: VSGFLVGTVA LVSWTYRYFR GMHPVGSNQM DYARSRIYDT ASHVKDYARE YGGYFHGRAK DAAPGA
Arabidopsis Description
Oleosin family protein [Source:UniProtKB/TrEMBL;Acc:Q9LII2]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.