Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- golgi 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_17s0000g04210.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G25140.1 | VIT_17s0000g04210.t01 | AT3G18570.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g034040.1.1 | Tomato | cytosol, golgi, plasma membrane, plastid | 68.75 | 67.35 |
| PGSC0003DMT400055585 | Potato | cytosol, endoplasmic reticulum, nucleus, plastid | 68.06 | 66.22 |
| GSMUA_Achr1P00500_001 | Banana | extracellular, golgi, plasma membrane | 59.03 | 65.89 |
| VIT_02s0234g00110.t01 | Wine grape | plastid | 59.72 | 64.66 |
| KRH34604 | Soybean | endoplasmic reticulum | 62.5 | 61.22 |
| KRG92187 | Soybean | nucleus | 61.81 | 60.54 |
| AT5G51210.1 | Thale cress | cytosol, golgi, plasma membrane | 53.47 | 54.61 |
| VIT_04s0008g00540.t01 | Wine grape | plasma membrane | 54.86 | 54.11 |
| CDY03377 | Canola | cytosol | 63.19 | 53.53 |
| Zm00001d027258_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 38.19 | 53.4 |
| AT4G25140.1 | Thale cress | cytosol, golgi, plasma membrane | 63.89 | 53.18 |
| Os04t0546500-01 | Rice | plastid | 54.17 | 52.7 |
| CDY34345 | Canola | cytosol | 61.81 | 52.35 |
| TraesCS2D01G414800.1 | Wheat | golgi | 57.64 | 51.88 |
| Zm00001d002768_P001 | Maize | golgi, peroxisome, plasma membrane | 55.56 | 51.28 |
| TraesCS2A01G417500.1 | Wheat | golgi | 56.94 | 50.93 |
| TraesCS2B01G436400.1 | Wheat | golgi, peroxisome, plasma membrane | 56.25 | 50.62 |
| CDY24856 | Canola | cytosol | 63.19 | 50.56 |
| Bra010474.1-P | Field mustard | cytosol, golgi, plasma membrane | 63.19 | 50.56 |
| CDY11058 | Canola | cytosol | 63.89 | 50.27 |
| Bra019186.1-P | Field mustard | cytosol, golgi, plasma membrane | 63.89 | 50.0 |
| EES12607 | Sorghum | golgi, peroxisome, plasma membrane | 55.56 | 50.0 |
| CDY08967 | Canola | cytosol, golgi, plasma membrane | 61.81 | 49.72 |
| Bra035733.1-P | Field mustard | plasma membrane | 50.69 | 48.99 |
| CDY05844 | Canola | cytosol | 50.69 | 48.99 |
| CDX92679 | Canola | cytosol | 63.19 | 48.92 |
| CDX71696 | Canola | cytosol | 50.0 | 48.32 |
| Bra013866.1-P | Field mustard | cytosol, golgi, nucleus | 62.5 | 46.15 |
| TraesCS5D01G188400.1 | Wheat | golgi, peroxisome, plasma membrane | 50.0 | 43.11 |
| TraesCS5B01G181700.1 | Wheat | golgi | 49.31 | 42.52 |
| HORVU5Hr1G056030.1 | Barley | golgi, peroxisome, plasma membrane | 49.31 | 42.52 |
| Os09t0324000-02 | Rice | plastid | 43.75 | 39.87 |
| KXG40436 | Sorghum | cytosol, golgi, plasma membrane | 45.14 | 38.92 |
| VIT_17s0000g09000.t01 | Wine grape | golgi, plasma membrane, vacuole | 38.19 | 38.73 |
| VIT_14s0066g00700.t01 | Wine grape | golgi, plasma membrane, plastid, vacuole | 31.94 | 32.86 |
| VIT_17s0000g04210.t01 | Wine grape | plastid | 36.11 | 32.3 |
| VIT_14s0066g00710.t01 | Wine grape | golgi, plasma membrane, plastid | 31.94 | 29.3 |
Protein Annotations
| EntrezGene:100249321 | wikigene:100249321 | MapMan:5.9.2 | UniProt:A5ASF5 | EMBL:AM433812 | ProteinID:CAN69350 |
| ProteinID:CAN69350.1 | ProteinID:CCB61203 | ProteinID:CCB61203.1 | EMBL:FN596738 | GO:GO:0000003 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005811 | GO:GO:0008150 |
| GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019915 | GO:GO:0019953 | EntrezGene:LOC100249321 |
| wikigene:LOC100249321 | InterPro:Oleosin | PFAM:PF01277 | ScanProsite:PS00811 | PANTHER:PTHR33203 | PANTHER:PTHR33203:SF3 |
| TMHMM:TMhelix | UniParc:UPI000151F712 | ArrayExpress:VIT_16s0013g00880 | EnsemblPlantsGene:VIT_16s0013g00880 | EnsemblPlants:VIT_16s0013g00880.t01 | unigene:Vvi.1891 |
| RefSeq:XP_002281746 | RefSeq:XP_002281746.1 | SEG:seg | : | : | : |
Description
Oleosin [Source:UniProtKB/TrEMBL;Acc:A5ASF5]
Coordinates
chr16:-:6563525..6564248
Molecular Weight (calculated)
15183.6 Da
IEP (calculated)
10.050
GRAVY (calculated)
0.306
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEIQPPHHI LHPHQPQPQQ PSYQAVKAAT AATAGGSLLV LSGLTLVGTV IALTVATPLL VIFSPVLVPA AIAVFFLVLG FLASGGFGVA AVTVLSWIYR
101: YVTGRHPPGA DHLDSARMKL ASKAREMKDR AEQFGQQHTG QQGT
101: YVTGRHPPGA DHLDSARMKL ASKAREMKDR AEQFGQQHTG QQGT
001: MADTARGTHH DIIGRDQYPM MGRDRDQYQM SGRGSDYSKS RQIAKAATAV TAGGSLLVLS SLTLVGTVIA LTVATPLLVI FSPILVPALI TVALLITGFL
101: SSGGFGIAAI TVFSWIYKYA TGEHPQGSDK LDSARMKLGS KAQDLKDRAQ YYGQQHTGGE HDRDRTRGGQ HTT
101: SSGGFGIAAI TVFSWIYKYA TGEHPQGSDK LDSARMKLGS KAQDLKDRAQ YYGQQHTGGE HDRDRTRGGQ HTT
Arabidopsis Description
OLEO1Oleosin [Source:UniProtKB/TrEMBL;Acc:A0A178V1V3]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.