Factsheet for VIT_02s0234g00110.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
vacuole 2
mitochondrion 1
golgi 3
plasma membrane 3
extracellular 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	golgi, plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0013g00880.t01	Wine grape	plasma membrane	64.66	59.72
PGSC0003DMT400062064	Potato	plasma membrane	56.39	55.97
PGSC0003DMT400067532	Potato	mitochondrion	58.65	55.71
Solyc08g078160.2.1	Tomato	mitochondrion	58.65	55.71
Solyc06g060840.1.1	Tomato	plastid	55.64	55.22
VIT_04s0008g00540.t01	Wine grape	plasma membrane	51.88	47.26
VIT_17s0000g09000.t01	Wine grape	golgi, plasma membrane, vacuole	37.59	35.21
VIT_17s0000g04210.t01	Wine grape	plastid	36.09	29.81
VIT_14s0066g00700.t01	Wine grape	golgi, plasma membrane, plastid, vacuole	29.32	27.86
VIT_14s0066g00710.t01	Wine grape	golgi, plasma membrane, plastid	31.58	26.75

Protein Annotations

EntrezGene:100854621	wikigene:100854621	MapMan:5.9.2	UniProt:A5AG74	EMBL:AM425948	ProteinID:CAN68989
ProteinID:CAN68989.1	ProteinID:CCB50072	ProteinID:CCB50072.1	ncoils:Coil	EMBL:FN595528	GO:GO:0000003
GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005811
GO:GO:0008150	GO:GO:0012511	GO:GO:0016020	GO:GO:0016021	GO:GO:0019915	GO:GO:0019953
EntrezGene:LOC100854621	wikigene:LOC100854621	InterPro:Oleosin	PFAM:PF01277	ScanProsite:PS00811	PANTHER:PTHR33203
PANTHER:PTHR33203:SF3	TIGR:TC62516	TIGR:TC68347	TMHMM:TMhelix	UniParc:UPI000151E929	ArrayExpress:VIT_02s0234g00110
EnsemblPlantsGene:VIT_02s0234g00110	EnsemblPlants:VIT_02s0234g00110.t01	unigene:Vvi.24603	unigene:Vvi.7419	RefSeq:XP_003631370	RefSeq:XP_003631370.1

Description

Oleosin [Source:UniProtKB/TrEMBL;Acc:A5AG74]

Coordinates

chr2:-:140385..141242

Molecular Weight (calculated)

13885.1 Da

IEP (calculated)

10.233

GRAVY (calculated)

0.409

Length

133 amino acids

Sequence
(BLAST)

001: MAHQDQPQKT QLSYQLIKTS TAATIGGSCM VLSGLTLAGT VIALVVATPL LVIFSPVLVP AAITVFLAAS GLVASGGFGV SAVSVFLWLY KYVRGQHPVG
101: ADRLDRARDK LTGKAMEVKE RAAEQIGTRG TQG

Best Arabidopsis Sequence Match ( AT4G25140.1 )
(BLAST)

001: MADTARGTHH DIIGRDQYPM MGRDRDQYQM SGRGSDYSKS RQIAKAATAV TAGGSLLVLS SLTLVGTVIA LTVATPLLVI FSPILVPALI TVALLITGFL
101: SSGGFGIAAI TVFSWIYKYA TGEHPQGSDK LDSARMKLGS KAQDLKDRAQ YYGQQHTGGE HDRDRTRGGQ HTT

Arabidopsis Description

OLEO1Oleosin [Source:UniProtKB/TrEMBL;Acc:A0A178V1V3]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.