Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- golgi 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400065474 | Potato | golgi, plasma membrane, vacuole | 56.16 | 58.57 |
| Bra034280.1-P | Field mustard | plasma membrane | 57.53 | 57.53 |
| CDY35326 | Canola | plasma membrane | 57.53 | 57.53 |
| CDX77021 | Canola | plasma membrane | 55.48 | 55.86 |
| VIT_16s0013g00880.t01 | Wine grape | plasma membrane | 54.11 | 54.86 |
| KRH61966 | Soybean | endoplasmic reticulum, nucleus | 61.64 | 53.57 |
| Solyc08g066040.1.1 | Tomato | golgi, plasma membrane, plastid | 51.37 | 53.57 |
| VIT_02s0234g00110.t01 | Wine grape | plastid | 47.26 | 51.88 |
| AT2G25890.2 | Thale cress | mitochondrion | 60.27 | 50.57 |
| VIT_17s0000g09000.t01 | Wine grape | golgi, plasma membrane, vacuole | 43.84 | 45.07 |
| KRH52626 | Soybean | endoplasmic reticulum | 63.01 | 43.4 |
| VIT_17s0000g04210.t01 | Wine grape | plastid | 45.21 | 40.99 |
| VIT_14s0066g00700.t01 | Wine grape | golgi, plasma membrane, plastid, vacuole | 33.56 | 35.0 |
| VIT_14s0066g00710.t01 | Wine grape | golgi, plasma membrane, plastid | 31.51 | 29.3 |
Protein Annotations
| EntrezGene:100262917 | wikigene:100262917 | MapMan:5.9.2 | UniProt:A5BPD9 | EMBL:AM466516 | ProteinID:CAN74835 |
| ProteinID:CAN74835.1 | ProteinID:CCB46536 | ProteinID:CCB46536.1 | EMBL:FN595231 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0019915 | EntrezGene:LOC100262917 | wikigene:LOC100262917 | InterPro:Oleosin | PFAM:PF01277 | PANTHER:PTHR33203 |
| PANTHER:PTHR33203:SF3 | TMHMM:TMhelix | UniParc:UPI00015217AB | ArrayExpress:VIT_04s0008g00540 | EnsemblPlantsGene:VIT_04s0008g00540 | EnsemblPlants:VIT_04s0008g00540.t01 |
| unigene:Vvi.12289 | RefSeq:XP_002275496 | RefSeq:XP_002275496.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4:-:473477..474187
Molecular Weight (calculated)
15600.1 Da
IEP (calculated)
9.417
GRAVY (calculated)
0.279
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDQPKPVTP KLYDSAPSSR QAVKFLTAAT IGTILLVLSG LTLTGTVIAL IIATPALVVF SPILVPAGTV IFLATTGFLF SGCCGVTALM ALSWLYEYVA
101: GKHPPGADQL DYARMRIANK ARDMKERAKE YGQYVHHKAQ EATQGS
101: GKHPPGADQL DYARMRIANK ARDMKERAKE YGQYVHHKAQ EATQGS
001: MVSLLKLQKQ HRTLNPYSLR KRKKEMADHQ QHQQQQQPIM RSLHESSPST RQIVRFVTAA TIGLSLLVLS GLTLTGTVIG LIVATPLMVL FSPVLVPAVI
101: TIGLLTMGFL FSGGCGVAAA TALTWIYKYV TGKHPMGADK VDYARMRIAE KAKELGHYTH SQPQQTHQTT TTTH
101: TIGLLTMGFL FSGGCGVAAA TALTWIYKYV TGKHPMGADK VDYARMRIAE KAKELGHYTH SQPQQTHQTT TTTH
Arabidopsis Description
Oleosin [Source:UniProtKB/TrEMBL;Acc:O82308]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.