Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- golgi 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034280.1-P | Field mustard | plasma membrane | 68.39 | 81.51 |
| CDY35326 | Canola | plasma membrane | 68.39 | 81.51 |
| CDX77021 | Canola | plasma membrane | 65.52 | 78.62 |
| VIT_04s0008g00540.t01 | Wine grape | plasma membrane | 50.57 | 60.27 |
| AT5G51210.1 | Thale cress | cytosol, golgi, plasma membrane | 37.36 | 46.1 |
| KRH61966 | Soybean | endoplasmic reticulum, nucleus | 44.25 | 45.83 |
| PGSC0003DMT400065474 | Potato | golgi, plasma membrane, vacuole | 36.78 | 45.71 |
| AT4G25140.1 | Thale cress | cytosol, golgi, plasma membrane | 43.1 | 43.35 |
| Solyc08g066040.1.1 | Tomato | golgi, plasma membrane, plastid | 32.76 | 40.71 |
| KRH52626 | Soybean | endoplasmic reticulum | 47.13 | 38.68 |
| AT3G27660.1 | Thale cress | cytosol, golgi, plasma membrane | 32.76 | 29.84 |
| AT1G48990.1 | Thale cress | plastid | 28.74 | 29.59 |
| AT5G40420.1 | Thale cress | cytosol | 33.33 | 29.15 |
| AT3G01570.1 | Thale cress | plasma membrane | 29.89 | 28.42 |
| AT3G18570.1 | Thale cress | golgi, peroxisome, plasma membrane, plastid | 26.44 | 27.71 |
Protein Annotations
| MapMan:5.9.2 | EntrezGene:817130 | ProteinID:AAC42242.1 | ProteinID:AEC07768.1 | ProteinID:ANM61827.1 | ArrayExpress:AT2G25890 |
| EnsemblPlantsGene:AT2G25890 | RefSeq:AT2G25890 | TAIR:AT2G25890 | RefSeq:AT2G25890-TAIR-G | EnsemblPlants:AT2G25890.2 | EMBL:BT023738 |
| GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005811 |
| GO:GO:0008150 | GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019915 | RefSeq:NP_001324024.1 |
| RefSeq:NP_180160.2 | UniProt:O82308 | ProteinID:OAP09099.1 | InterPro:Oleosin | PFAM:PF01277 | ScanProsite:PS00811 |
| PANTHER:PTHR33203 | PANTHER:PTHR33203:SF3 | TMHMM:TMhelix | UniParc:UPI000009E934 | SEG:seg | : |
Description
Oleosin [Source:UniProtKB/TrEMBL;Acc:O82308]
Coordinates
chr2:+:11037303..11038179
Molecular Weight (calculated)
19215.7 Da
IEP (calculated)
10.760
GRAVY (calculated)
-0.019
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSLLKLQKQ HRTLNPYSLR KRKKEMADHQ QHQQQQQPIM RSLHESSPST RQIVRFVTAA TIGLSLLVLS GLTLTGTVIG LIVATPLMVL FSPVLVPAVI
101: TIGLLTMGFL FSGGCGVAAA TALTWIYKYV TGKHPMGADK VDYARMRIAE KAKELGHYTH SQPQQTHQTT TTTH
101: TIGLLTMGFL FSGGCGVAAA TALTWIYKYV TGKHPMGADK VDYARMRIAE KAKELGHYTH SQPQQTHQTT TTTH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.