Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11685 | Canola | cytosol | 85.43 | 85.0 |
| CDX67456 | Canola | cytosol | 84.92 | 84.5 |
| Bra028458.1-P | Field mustard | golgi, nucleus, peroxisome | 86.43 | 81.52 |
| Bra025577.1-P | Field mustard | cytosol, golgi, nucleus | 84.42 | 76.36 |
| CDY50118 | Canola | cytosol | 80.9 | 70.31 |
| AT3G27660.1 | Thale cress | cytosol, golgi, plasma membrane | 60.3 | 62.83 |
| Solyc02g086490.2.1 | Tomato | extracellular | 41.21 | 55.03 |
| GSMUA_AchrUn_... | Banana | cytosol, golgi, plasma membrane | 41.21 | 55.03 |
| AT3G01570.1 | Thale cress | plasma membrane | 49.75 | 54.1 |
| Solyc12g010920.1.1 | Tomato | cytosol, golgi, plasma membrane | 43.22 | 50.0 |
| PGSC0003DMT400032872 | Potato | cytosol, golgi, plastid | 41.71 | 50.0 |
| VIT_14s0066g00700.t01 | Wine grape | golgi, plasma membrane, plastid, vacuole | 33.17 | 47.14 |
| VIT_14s0066g00710.t01 | Wine grape | golgi, plasma membrane, plastid | 33.67 | 42.68 |
| Os03t0699000-01 | Rice | plastid | 35.68 | 41.28 |
| Zm00001d033612_P001 | Maize | cytosol, golgi, plasma membrane | 36.18 | 40.91 |
| KRG93234 | Soybean | nucleus | 37.69 | 39.68 |
| KRG94116 | Soybean | nucleus | 43.72 | 38.5 |
| Zm00001d013494_P001 | Maize | cytosol | 35.68 | 38.17 |
| KRH07172 | Soybean | endoplasmic reticulum, nucleus | 42.21 | 37.67 |
| AT5G51210.1 | Thale cress | cytosol, golgi, plasma membrane | 25.63 | 36.17 |
| GSMUA_Achr4P13900_001 | Banana | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 34.17 | 35.79 |
| KRH56554 | Soybean | endoplasmic reticulum, nucleus | 34.17 | 34.34 |
| AT2G25890.2 | Thale cress | mitochondrion | 29.15 | 33.33 |
| HORVU4Hr1G005800.1 | Barley | plastid | 36.68 | 30.54 |
| KXG37789 | Sorghum | plastid | 36.68 | 28.29 |
| AT4G25140.1 | Thale cress | cytosol, golgi, plasma membrane | 24.12 | 27.75 |
| AT3G18570.1 | Thale cress | golgi, peroxisome, plasma membrane, plastid | 22.11 | 26.51 |
| AT1G48990.1 | Thale cress | plastid | 22.11 | 26.04 |
Protein Annotations
| MapMan:5.9.2 | EntrezGene:834040 | UniProt:A0A178UA73 | ProteinID:AED94546.1 | ArrayExpress:AT5G40420 | EnsemblPlantsGene:AT5G40420 |
| RefSeq:AT5G40420 | TAIR:AT5G40420 | RefSeq:AT5G40420-TAIR-G | EnsemblPlants:AT5G40420.1 | TAIR:AT5G40420.1 | EMBL:AY057590 |
| EMBL:AY113011 | Unigene:At.19967 | ProteinID:BAB11599.1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003729 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005811 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009628 |
| GO:GO:0009791 | GO:GO:0009845 | GO:GO:0010344 | GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0019915 | GO:GO:0050826 | EMBL:L40954 | RefSeq:NP_198858.1 | ProteinID:OAO90560.1 | Symbol:OLEO2 |
| InterPro:Oleosin | PFAM:PF01277 | PANTHER:PTHR33203 | PANTHER:PTHR33203:SF16 | UniProt:Q39165 | TMHMM:TMhelix |
| UniParc:UPI000000146A | EMBL:X91956 | EMBL:Z17657 | SEG:seg | : | : |
Description
OLEO2Oleosin 21.2 kDa [Source:UniProtKB/Swiss-Prot;Acc:Q39165]
Coordinates
chr5:-:16173340..16174783
Molecular Weight (calculated)
21280.7 Da
IEP (calculated)
9.736
GRAVY (calculated)
-0.140
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MADTHRVDRT DRHFQFQSPY EGGRGQGQYE GDRGYGGGGY KSMMPESGPS STQVLSLLIG VPVVGSLLAL AGLLLAGSVI GLMVALPLFL LFSPVIVPAA
101: LTIGLAMTGF LASGMFGLTG LSSISWVMNY LRGTRRTVPE QLEYAKRRMA DAVGYAGQKG KEMGQHVQNK AQDVKQYDIS KPHDTTTKGH ETQGRTTAA
101: LTIGLAMTGF LASGMFGLTG LSSISWVMNY LRGTRRTVPE QLEYAKRRMA DAVGYAGQKG KEMGQHVQNK AQDVKQYDIS KPHDTTTKGH ETQGRTTAA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.