Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03377 | Canola | cytosol | 92.49 | 94.12 |
| CDY34345 | Canola | cytosol | 90.17 | 91.76 |
| CDY24856 | Canola | cytosol | 91.91 | 88.33 |
| Bra010474.1-P | Field mustard | cytosol, golgi, plasma membrane | 91.91 | 88.33 |
| CDY08967 | Canola | cytosol, golgi, plasma membrane | 89.6 | 86.59 |
| CDY11058 | Canola | cytosol | 90.17 | 85.25 |
| Bra019186.1-P | Field mustard | cytosol, golgi, plasma membrane | 89.6 | 84.24 |
| CDX92679 | Canola | cytosol | 90.17 | 83.87 |
| Bra013866.1-P | Field mustard | cytosol, golgi, nucleus | 91.33 | 81.03 |
| AT5G51210.1 | Thale cress | cytosol, golgi, plasma membrane | 52.6 | 64.54 |
| VIT_16s0013g00880.t01 | Wine grape | plasma membrane | 53.18 | 63.89 |
| GSMUA_Achr1P00500_001 | Banana | extracellular, golgi, plasma membrane | 43.93 | 58.91 |
| PGSC0003DMT400055585 | Potato | cytosol, endoplasmic reticulum, nucleus, plastid | 50.29 | 58.78 |
| Solyc06g034040.1.1 | Tomato | cytosol, golgi, plasma membrane, plastid | 49.71 | 58.5 |
| KRG92187 | Soybean | nucleus | 46.82 | 55.1 |
| KRH34604 | Soybean | endoplasmic reticulum | 46.24 | 54.42 |
| Zm00001d027258_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 30.64 | 51.46 |
| Os04t0546500-01 | Rice | plastid | 43.93 | 51.35 |
| Zm00001d002768_P001 | Maize | golgi, peroxisome, plasma membrane | 45.66 | 50.64 |
| EES12607 | Sorghum | golgi, peroxisome, plasma membrane | 45.66 | 49.38 |
| TraesCS2A01G417500.1 | Wheat | golgi | 45.66 | 49.07 |
| TraesCS2D01G414800.1 | Wheat | golgi | 45.09 | 48.75 |
| TraesCS2B01G436400.1 | Wheat | golgi, peroxisome, plasma membrane | 43.93 | 47.5 |
| KXG40436 | Sorghum | cytosol, golgi, plasma membrane | 42.77 | 44.31 |
| HORVU5Hr1G056030.1 | Barley | golgi, peroxisome, plasma membrane | 41.62 | 43.11 |
| AT2G25890.2 | Thale cress | mitochondrion | 43.35 | 43.1 |
| TraesCS5D01G188400.1 | Wheat | golgi, peroxisome, plasma membrane | 41.04 | 42.52 |
| TraesCS5B01G181700.1 | Wheat | golgi | 41.04 | 42.52 |
| Os09t0324000-02 | Rice | plastid | 36.42 | 39.87 |
| AT1G48990.1 | Thale cress | plastid | 27.17 | 27.81 |
| AT3G18570.1 | Thale cress | golgi, peroxisome, plasma membrane, plastid | 26.01 | 27.11 |
| AT3G01570.1 | Thale cress | plasma membrane | 27.75 | 26.23 |
| AT3G27660.1 | Thale cress | cytosol, golgi, plasma membrane | 27.17 | 24.61 |
| AT5G40420.1 | Thale cress | cytosol | 27.75 | 24.12 |
Protein Annotations
| MapMan:5.9.2 | EntrezGene:828617 | UniProt:A0A178V1V3 | ProteinID:AEE85016.1 | ArrayExpress:AT4G25140 | EnsemblPlantsGene:AT4G25140 |
| RefSeq:AT4G25140 | TAIR:AT4G25140 | RefSeq:AT4G25140-TAIR-G | EnsemblPlants:AT4G25140.1 | TAIR:AT4G25140.1 | Unigene:At.21703 |
| EMBL:BT010189 | ProteinID:CAA44225.1 | ProteinID:CAB36756.1 | ProteinID:CAB79423.1 | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005811 |
| GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009791 | GO:GO:0009845 |
| GO:GO:0010344 | GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019915 | GO:GO:0019953 |
| GO:GO:0050826 | RefSeq:NP_194244.1 | ProteinID:OAP00340.1 | Symbol:OLEO1 | InterPro:Oleosin | UniProt:P29525 |
| PFAM:PF01277 | PO:PO:0000037 | ScanProsite:PS00811 | PANTHER:PTHR33203 | PANTHER:PTHR33203:SF7 | TMHMM:TMhelix |
| UniParc:UPI0000130C67 | EMBL:Z17738 | SEG:seg | : | : | : |
Description
OLEO1Oleosin [Source:UniProtKB/TrEMBL;Acc:A0A178V1V3]
Coordinates
chr4:+:12900430..12901577
Molecular Weight (calculated)
18570.2 Da
IEP (calculated)
9.813
GRAVY (calculated)
-0.168
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MADTARGTHH DIIGRDQYPM MGRDRDQYQM SGRGSDYSKS RQIAKAATAV TAGGSLLVLS SLTLVGTVIA LTVATPLLVI FSPILVPALI TVALLITGFL
101: SSGGFGIAAI TVFSWIYKYA TGEHPQGSDK LDSARMKLGS KAQDLKDRAQ YYGQQHTGGE HDRDRTRGGQ HTT
101: SSGGFGIAAI TVFSWIYKYA TGEHPQGSDK LDSARMKLGS KAQDLKDRAQ YYGQQHTGGE HDRDRTRGGQ HTT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.