Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g086490.2.1 | Tomato | extracellular | 44.81 | 55.03 |
| PGSC0003DMT400032872 | Potato | cytosol, golgi, plastid | 46.45 | 51.2 |
| VIT_14s0066g00710.t01 | Wine grape | golgi, plasma membrane, plastid | 43.72 | 50.96 |
| AT3G27660.1 | Thale cress | cytosol, golgi, plasma membrane | 53.01 | 50.79 |
| GSMUA_AchrUn_... | Banana | cytosol, golgi, plasma membrane | 40.98 | 50.34 |
| AT5G40420.1 | Thale cress | cytosol | 54.1 | 49.75 |
| Solyc12g010920.1.1 | Tomato | cytosol, golgi, plasma membrane | 45.36 | 48.26 |
| VIT_14s0066g00700.t01 | Wine grape | golgi, plasma membrane, plastid, vacuole | 36.61 | 47.86 |
| KRH07172 | Soybean | endoplasmic reticulum, nucleus | 51.37 | 42.15 |
| Os03t0699000-01 | Rice | plastid | 39.34 | 41.86 |
| KRG94116 | Soybean | nucleus | 51.37 | 41.59 |
| Zm00001d033612_P001 | Maize | cytosol, golgi, plasma membrane | 38.25 | 39.77 |
| KRG93234 | Soybean | nucleus | 40.44 | 39.15 |
| Zm00001d013494_P001 | Maize | cytosol | 38.8 | 38.17 |
| KRH56554 | Soybean | endoplasmic reticulum, nucleus | 38.25 | 35.35 |
| GSMUA_Achr4P13900_001 | Banana | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 35.52 | 34.21 |
| AT5G51210.1 | Thale cress | cytosol, golgi, plasma membrane | 24.04 | 31.21 |
| HORVU4Hr1G005800.1 | Barley | plastid | 40.44 | 30.96 |
| AT2G25890.2 | Thale cress | mitochondrion | 28.42 | 29.89 |
| KXG37789 | Sorghum | plastid | 40.44 | 28.68 |
| AT4G25140.1 | Thale cress | cytosol, golgi, plasma membrane | 26.23 | 27.75 |
| AT1G48990.1 | Thale cress | plastid | 24.04 | 26.04 |
| AT3G18570.1 | Thale cress | golgi, peroxisome, plasma membrane, plastid | 19.67 | 21.69 |
Protein Annotations
| MapMan:5.9.2 | EntrezGene:821106 | UniProt:A0A178VDK3 | ProteinID:AAF01542.1 | ProteinID:AEE73689.1 | ArrayExpress:AT3G01570 |
| EnsemblPlantsGene:AT3G01570 | RefSeq:AT3G01570 | TAIR:AT3G01570 | RefSeq:AT3G01570-TAIR-G | EnsemblPlants:AT3G01570.1 | TAIR:AT3G01570.1 |
| EMBL:AY059936 | EMBL:AY081655 | Unigene:At.18462 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005811 | GO:GO:0006810 | GO:GO:0006950 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009791 | GO:GO:0010344 | GO:GO:0012511 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019915 | GO:GO:0050826 | GO:GO:0055085 | InterPro:IPR000515 |
| InterPro:MetI-like | RefSeq:NP_186806.1 | ProteinID:OAP04299.1 | InterPro:Oleosin | PFAM:PF01277 | ScanProsite:PS00811 |
| PANTHER:PTHR33203 | PANTHER:PTHR33203:SF16 | UniProt:Q9SS98 | TMHMM:TMhelix | UniParc:UPI00000A7A75 | SEG:seg |
Description
Oleosin 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS98]
Coordinates
chr3:-:221939..222827
Molecular Weight (calculated)
19755.9 Da
IEP (calculated)
8.011
GRAVY (calculated)
0.027
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MADVRTHSHQ LQVHPQRQHE GGIKVLYPQS GPSSTQVLAV FVGVPIGGTL LTIAGLTLAG SVIGLMLAFP LFLIFSPVIV PAAFVIGLAM TGFLASGAIG
101: LTGLSSMSWV LNYIRRAGQH IPEELEEAKH RLADMAEYVG QRTKDAGQTI EDKAHDVREA KTFDVRDRDT TKGTHNVRDT KTT
101: LTGLSSMSWV LNYIRRAGQH IPEELEEAKH RLADMAEYVG QRTKDAGQTI EDKAHDVREA KTFDVRDRDT TKGTHNVRDT KTT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.