Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 2
- golgi 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_14s0066g00700.t01 | Wine grape | golgi, plasma membrane, plastid, vacuole | 53.5 | 60.0 |
| Solyc12g010920.1.1 | Tomato | cytosol, golgi, plasma membrane | 56.05 | 51.16 |
| Solyc02g086490.2.1 | Tomato | extracellular | 47.77 | 50.34 |
| VIT_17s0000g09000.t01 | Wine grape | golgi, plasma membrane, vacuole | 44.59 | 49.3 |
| PGSC0003DMT400032872 | Potato | cytosol, golgi, plastid | 51.59 | 48.8 |
| AT3G01570.1 | Thale cress | plasma membrane | 50.96 | 43.72 |
| AT3G27660.1 | Thale cress | cytosol, golgi, plasma membrane | 47.13 | 38.74 |
| CDY20040 | Canola | cytosol | 44.59 | 37.23 |
| Bra039071.1-P | Field mustard | golgi, peroxisome, plasma membrane | 44.59 | 37.23 |
| CDY03988 | Canola | cytosol, endoplasmic reticulum, golgi | 45.22 | 37.17 |
| CDY49771 | Canola | cytosol | 43.95 | 36.7 |
| Bra033021.1-P | Field mustard | golgi, peroxisome, plasma membrane | 43.95 | 36.7 |
| KRG94116 | Soybean | nucleus | 51.59 | 35.84 |
| KRH07172 | Soybean | endoplasmic reticulum, nucleus | 49.68 | 34.98 |
| KRG93234 | Soybean | nucleus | 42.04 | 34.92 |
| CDX67456 | Canola | cytosol | 43.31 | 34.0 |
| AT5G40420.1 | Thale cress | cytosol | 42.68 | 33.67 |
| CDY11685 | Canola | cytosol | 42.68 | 33.5 |
| VIT_16s0013g00880.t01 | Wine grape | plasma membrane | 29.3 | 31.94 |
| Bra028458.1-P | Field mustard | golgi, nucleus, peroxisome | 42.68 | 31.75 |
| VIT_02s0234g00110.t01 | Wine grape | plastid | 26.75 | 31.58 |
| VIT_04s0008g00540.t01 | Wine grape | plasma membrane | 29.3 | 31.51 |
| Bra025577.1-P | Field mustard | cytosol, golgi, nucleus | 43.95 | 31.36 |
| KRH56554 | Soybean | endoplasmic reticulum, nucleus | 39.49 | 31.31 |
| CDY50118 | Canola | cytosol | 39.49 | 27.07 |
| VIT_17s0000g04210.t01 | Wine grape | plastid | 26.11 | 25.47 |
Protein Annotations
| EntrezGene:100252638 | wikigene:100252638 | MapMan:5.9.2 | ProteinID:CCB58483 | ProteinID:CCB58483.1 | UniProt:F6HUW5 |
| EMBL:FN596252 | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009791 | GO:GO:0010344 |
| GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019915 | GO:GO:0050826 | EntrezGene:LOC100252638 |
| wikigene:LOC100252638 | InterPro:Oleosin | PFAM:PF01277 | PANTHER:PTHR33203 | PANTHER:PTHR33203:SF17 | TIGR:TC69299 |
| TIGR:TC69302 | TMHMM:TMhelix | UniParc:UPI0001984BB0 | ArrayExpress:VIT_14s0066g00710 | EnsemblPlantsGene:VIT_14s0066g00710 | EnsemblPlants:VIT_14s0066g00710.t01 |
| unigene:Vvi.1903 | RefSeq:XP_002275021 | RefSeq:XP_002275021.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr14:+:27170156..27170812
Molecular Weight (calculated)
16264.2 Da
IEP (calculated)
10.786
GRAVY (calculated)
0.526
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MADRPQPHQL QVHPQHLYNA GIKTLLPQKG PSTSQVLAVI ALLPLAGFLL LLAGLTFAGS ALGLAVITPL FLIFSPVLVP ATIAIGLAVV SFVTSGAFGV
101: TGLSSLSFAV NSFRQAAAPL PGYLRSAMDK LGEKTKGLGQ GIQKQAHEGG PIRKLGY
101: TGLSSLSFAV NSFRQAAAPL PGYLRSAMDK LGEKTKGLGQ GIQKQAHEGG PIRKLGY
001: MADVRTHSHQ LQVHPQRQHE GGIKVLYPQS GPSSTQVLAV FVGVPIGGTL LTIAGLTLAG SVIGLMLAFP LFLIFSPVIV PAAFVIGLAM TGFLASGAIG
101: LTGLSSMSWV LNYIRRAGQH IPEELEEAKH RLADMAEYVG QRTKDAGQTI EDKAHDVREA KTFDVRDRDT TKGTHNVRDT KTT
101: LTGLSSMSWV LNYIRRAGQH IPEELEEAKH RLADMAEYVG QRTKDAGQTI EDKAHDVREA KTFDVRDRDT TKGTHNVRDT KTT
Arabidopsis Description
Oleosin 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS98]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.