Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- golgi 2
- plasma membrane 3
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g086490.2.1 | Tomato | extracellular | 57.56 | 66.44 |
| Solyc03g112440.1.1 | Tomato | golgi, plasma membrane, plastid | 55.81 | 62.75 |
| GSMUA_AchrUn_... | Banana | cytosol, golgi, plasma membrane | 50.0 | 57.72 |
| VIT_14s0066g00710.t01 | Wine grape | golgi, plasma membrane, plastid | 51.16 | 56.05 |
| VIT_14s0066g00700.t01 | Wine grape | golgi, plasma membrane, plastid, vacuole | 43.6 | 53.57 |
| Zm00001d033612_P001 | Maize | cytosol, golgi, plasma membrane | 47.67 | 46.59 |
| Os03t0699000-01 | Rice | plastid | 45.93 | 45.93 |
| AT3G01570.1 | Thale cress | plasma membrane | 48.26 | 45.36 |
| AT3G27660.1 | Thale cress | cytosol, golgi, plasma membrane | 50.0 | 45.03 |
| Zm00001d013494_P001 | Maize | cytosol | 48.26 | 44.62 |
| CDY03988 | Canola | cytosol, endoplasmic reticulum, golgi | 49.42 | 44.5 |
| CDY49771 | Canola | cytosol | 48.26 | 44.15 |
| Bra033021.1-P | Field mustard | golgi, peroxisome, plasma membrane | 48.26 | 44.15 |
| CDY20040 | Canola | cytosol | 47.67 | 43.62 |
| Bra039071.1-P | Field mustard | golgi, peroxisome, plasma membrane | 47.67 | 43.62 |
| KRG94116 | Soybean | nucleus | 56.98 | 43.36 |
| AT5G40420.1 | Thale cress | cytosol | 50.0 | 43.22 |
| KRH07172 | Soybean | endoplasmic reticulum, nucleus | 55.23 | 42.6 |
| GSMUA_Achr4P13900_001 | Banana | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 46.51 | 42.11 |
| CDY11685 | Canola | cytosol | 48.84 | 42.0 |
| CDX67456 | Canola | cytosol | 48.26 | 41.5 |
| Bra028458.1-P | Field mustard | golgi, nucleus, peroxisome | 48.84 | 39.81 |
| KRG93234 | Soybean | nucleus | 43.6 | 39.68 |
| Solyc06g060840.1.1 | Tomato | plastid | 30.23 | 38.81 |
| Bra025577.1-P | Field mustard | cytosol, golgi, nucleus | 47.67 | 37.27 |
| Solyc08g078160.2.1 | Tomato | mitochondrion | 30.23 | 37.14 |
| Solyc06g034040.1.1 | Tomato | cytosol, golgi, plasma membrane, plastid | 31.4 | 36.73 |
| Solyc08g066040.1.1 | Tomato | golgi, plasma membrane, plastid | 29.65 | 36.43 |
| KRH56554 | Soybean | endoplasmic reticulum, nucleus | 41.86 | 36.36 |
| HORVU4Hr1G005800.1 | Barley | plastid | 48.26 | 34.73 |
| KXG37789 | Sorghum | plastid | 49.42 | 32.95 |
| CDY50118 | Canola | cytosol | 43.6 | 32.75 |
| Solyc03g119820.1.1 | Tomato | plastid | 30.23 | 31.52 |
| Solyc06g069260.1.1 | Tomato | plasma membrane, plastid | 25.0 | 28.1 |
Protein Annotations
| MapMan:5.9.2 | ncoils:Coil | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005811 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009628 |
| GO:GO:0009791 | GO:GO:0010344 | GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019915 |
| GO:GO:0050826 | UniProt:K4DCH8 | InterPro:Oleosin | PFAM:PF01277 | ScanProsite:PS00811 | PANTHER:PTHR33203 |
| PANTHER:PTHR33203:SF16 | EnsemblPlantsGene:Solyc12g010920.1 | EnsemblPlants:Solyc12g010920.1.1 | TMHMM:TMhelix | UniParc:UPI0002769FF8 | SEG:seg |
Description
Oleosin [Source:UniProtKB/TrEMBL;Acc:K4DCH8]
Coordinates
chr12:+:3815832..3816769
Molecular Weight (calculated)
18195.1 Da
IEP (calculated)
10.268
GRAVY (calculated)
0.113
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDRDRTQYP HQVQVHPSSR YEGGISTLLP QKGPSTSQVL AVVTLVPVGG ILLGLAGLTL LGTIIGLAVA TPVFLLFSPV LVPAAVTVAL AVTGFLTSGA
101: FGLTGLSSLS WIVNYFKQGR TTMEQLDYTK RRIQERAAEA AAQVGQKTKE TGQAIQSKAQ ETKESARSDV RA
101: FGLTGLSSLS WIVNYFKQGR TTMEQLDYTK RRIQERAAEA AAQVGQKTKE TGQAIQSKAQ ETKESARSDV RA
001: MADVRTHSHQ LQVHPQRQHE GGIKVLYPQS GPSSTQVLAV FVGVPIGGTL LTIAGLTLAG SVIGLMLAFP LFLIFSPVIV PAAFVIGLAM TGFLASGAIG
101: LTGLSSMSWV LNYIRRAGQH IPEELEEAKH RLADMAEYVG QRTKDAGQTI EDKAHDVREA KTFDVRDRDT TKGTHNVRDT KTT
101: LTGLSSMSWV LNYIRRAGQH IPEELEEAKH RLADMAEYVG QRTKDAGQTI EDKAHDVREA KTFDVRDRDT TKGTHNVRDT KTT
Arabidopsis Description
Oleosin 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS98]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.