CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033612_P001	Maize	cytosol, golgi, plasma membrane	63.18	92.61
Zm00001d013494_P001	Maize	cytosol	65.12	90.32
Os03t0699000-01	Rice	plastid	54.26	81.4
HORVU4Hr1G005800.1	Barley	plastid	61.63	66.53
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	35.66	61.74
Solyc02g086490.2.1	Tomato	extracellular	31.78	55.03
PGSC0003DMT400046816	Potato	plastid	30.23	52.7
VIT_17s0000g09000.t01	Wine grape	golgi, plasma membrane, vacuole	27.91	50.7
PGSC0003DMT400032872	Potato	cytosol, golgi, plastid	32.56	50.6
Solyc03g112440.1.1	Tomato	golgi, plasma membrane, plastid	29.46	49.67
Solyc12g010920.1.1	Tomato	cytosol, golgi, plasma membrane	32.95	49.42
GSMUA_Achr4P13900_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	30.23	41.05
AT3G01570.1	Thale cress	plasma membrane	28.68	40.44
Bra033021.1-P	Field mustard	golgi, peroxisome, plasma membrane	27.52	37.77
CDY49771	Canola	cytosol	27.52	37.77
AT3G27660.1	Thale cress	cytosol, golgi, plasma membrane	27.91	37.7
CDY03988	Canola	cytosol, endoplasmic reticulum, golgi	27.52	37.17
AT5G40420.1	Thale cress	cytosol	28.29	36.68
Bra039071.1-P	Field mustard	golgi, peroxisome, plasma membrane	26.36	36.17
CDY20040	Canola	cytosol	26.36	36.17
CDY11685	Canola	cytosol	27.13	35.0
KRG93234	Soybean	nucleus	25.58	34.92
CDX67456	Canola	cytosol	26.74	34.5
Bra028458.1-P	Field mustard	golgi, nucleus, peroxisome	27.13	33.18
Bra025577.1-P	Field mustard	cytosol, golgi, nucleus	27.91	32.73
KRG94116	Soybean	nucleus	27.91	31.86
EES12607	Sorghum	golgi, peroxisome, plasma membrane	19.38	31.25
KRH07172	Soybean	endoplasmic reticulum, nucleus	26.36	30.49
CDY50118	Canola	cytosol	26.36	29.69
KRH56554	Soybean	endoplasmic reticulum, nucleus	22.48	29.29
EES19991	Sorghum	golgi, mitochondrion, peroxisome, plastid	15.12	23.35
KXG40436	Sorghum	cytosol, golgi, plasma membrane	13.57	20.96
OQU87227	Sorghum	plastid	13.18	17.62

Protein Annotations

EnsemblPlants:KXG37789	EnsemblPlantsGene:SORBI_3001G126900	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005811	GO:GO:0012511	GO:GO:0016020	GO:GO:0016021	InterPro:Oleosin	PANTHER:PTHR33203
PANTHER:PTHR33203:SF6	PFAM:PF01277	ProteinID:KXG37789	ProteinID:KXG37789.1	ProteinID:KXG37790.1	ScanProsite:PS00811
SEG:seg	TMHMM:TMhelix	UniParc:UPI00081AC844	UniProt:A0A1B6QIQ9	MapMan:5.9.2	:

Description

hypothetical protein

Coordinates

chr1:+:9964452..9969263

Molecular Weight (calculated)

25912.1 Da

IEP (calculated)

10.627

GRAVY (calculated)

0.055

Length

258 amino acids

Sequence
(BLAST)

001: MQASTPATYP PPFPYVSPLS PPIYGGGLGQ AFPLHFSLLQ LQSSLIHPRS LTPPPRPQRA RTAQTTNSAA TAMADRDRSG IYGGTYGQHQ QGGGRPMGEQ
101: VKGMIQDKGP TASQALTVAT LFPLGGLLLV LSGLALAASV VGLALATPVF LLFSPVLVPA ALLIGTAVTG FLTSGALGLG GLSSLTCLAN TARQAFQRTP
201: DYVEEARRRM AEAAAHAGQK TAQAGHAIQS RAQEAASGGA GAGGGTGAGT GGGGRASS

Best Arabidopsis Sequence Match ( AT3G01570.1 )
(BLAST)

001: MADVRTHSHQ LQVHPQRQHE GGIKVLYPQS GPSSTQVLAV FVGVPIGGTL LTIAGLTLAG SVIGLMLAFP LFLIFSPVIV PAAFVIGLAM TGFLASGAIG
101: LTGLSSMSWV LNYIRRAGQH IPEELEEAKH RLADMAEYVG QRTKDAGQTI EDKAHDVREA KTFDVRDRDT TKGTHNVRDT KTT

Arabidopsis Description

Oleosin 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS98]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.