Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G25140.1 | EES19991 | AT3G18570.1 | 21798944 |
| AT4G25140.1 | OQU87227 | AT3G18570.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027258_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 47.9 | 77.67 |
| HORVU5Hr1G056030.1 | Barley | golgi, peroxisome, plasma membrane | 59.28 | 59.28 |
| TraesCS5D01G188400.1 | Wheat | golgi, peroxisome, plasma membrane | 56.29 | 56.29 |
| TraesCS5B01G181700.1 | Wheat | golgi | 56.29 | 56.29 |
| Os09t0324000-02 | Rice | plastid | 52.69 | 55.7 |
| GSMUA_Achr1P00500_001 | Banana | extracellular, golgi, plasma membrane | 40.12 | 51.94 |
| EES12607 | Sorghum | golgi, peroxisome, plasma membrane | 44.91 | 46.88 |
| VIT_16s0013g00880.t01 | Wine grape | plasma membrane | 38.92 | 45.14 |
| Solyc06g034040.1.1 | Tomato | cytosol, golgi, plasma membrane, plastid | 38.92 | 44.22 |
| PGSC0003DMT400055585 | Potato | cytosol, endoplasmic reticulum, nucleus, plastid | 38.32 | 43.24 |
| KRG92187 | Soybean | nucleus | 37.72 | 42.86 |
| AT4G25140.1 | Thale cress | cytosol, golgi, plasma membrane | 44.31 | 42.77 |
| AT5G51210.1 | Thale cress | cytosol, golgi, plasma membrane | 35.93 | 42.55 |
| CDY34345 | Canola | cytosol | 43.11 | 42.35 |
| KRH34604 | Soybean | endoplasmic reticulum | 37.13 | 42.18 |
| CDY03377 | Canola | cytosol | 42.52 | 41.76 |
| CDY24856 | Canola | cytosol | 44.31 | 41.11 |
| Bra010474.1-P | Field mustard | cytosol, golgi, plasma membrane | 44.31 | 41.11 |
| CDY11058 | Canola | cytosol | 43.71 | 39.89 |
| Bra019186.1-P | Field mustard | cytosol, golgi, plasma membrane | 43.71 | 39.67 |
| CDY08967 | Canola | cytosol, golgi, plasma membrane | 42.52 | 39.66 |
| CDX92679 | Canola | cytosol | 43.71 | 39.25 |
| Bra035733.1-P | Field mustard | plasma membrane | 34.73 | 38.93 |
| CDY05844 | Canola | cytosol | 34.73 | 38.93 |
| CDX71696 | Canola | cytosol | 34.13 | 38.26 |
| Bra013866.1-P | Field mustard | cytosol, golgi, nucleus | 43.11 | 36.92 |
| EES19991 | Sorghum | golgi, mitochondrion, peroxisome, plastid | 27.54 | 27.54 |
| OQU87227 | Sorghum | plastid | 22.16 | 19.17 |
| KXG37789 | Sorghum | plastid | 20.96 | 13.57 |
Protein Annotations
| EnsemblPlants:KXG40436 | EnsemblPlantsGene:SORBI_3001G544400 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005811 | GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Oleosin | PANTHER:PTHR33203 |
| PANTHER:PTHR33203:SF1 | PFAM:PF01277 | ProteinID:KXG40436 | ProteinID:KXG40436.1 | ScanProsite:PS00811 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI00081AC70F | UniProt:A0A1B6QR90 | MapMan:5.9.2 | : | : |
Description
hypothetical protein
Coordinates
chr1:-:80870772..80871724
Molecular Weight (calculated)
17532.6 Da
IEP (calculated)
7.463
GRAVY (calculated)
0.011
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGGHHADD AHHHRGGGRR SDAVGENYMR GLYGDDDYNA SHYGQQQSAG TAVAKALASA TAAFTLLVLS GLAVTGTVLA LIVATPLLVI FSPVLVPAAI
101: TVALLTTGFV SSGGFGAAAV AVLAWMYRYL QTTTSSSDQQ QHQHQLSGKA HDVKDWAQHR LEQARAH
101: TVALLTTGFV SSGGFGAAAV AVLAWMYRYL QTTTSSSDQQ QHQHQLSGKA HDVKDWAQHR LEQARAH
001: MADTARGTHH DIIGRDQYPM MGRDRDQYQM SGRGSDYSKS RQIAKAATAV TAGGSLLVLS SLTLVGTVIA LTVATPLLVI FSPILVPALI TVALLITGFL
101: SSGGFGIAAI TVFSWIYKYA TGEHPQGSDK LDSARMKLGS KAQDLKDRAQ YYGQQHTGGE HDRDRTRGGQ HTT
101: SSGGFGIAAI TVFSWIYKYA TGEHPQGSDK LDSARMKLGS KAQDLKDRAQ YYGQQHTGGE HDRDRTRGGQ HTT
Arabidopsis Description
OLEO1Oleosin [Source:UniProtKB/TrEMBL;Acc:A0A178V1V3]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.