Factsheet for Bra019186.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

nucleus 3
golgi 3
peroxisome 1
mitochondrion 1
plastid 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	golgi
Plant-mPloc:	golgi, mitochondrion, nucleus, peroxisome, plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001711.1-P
Bra022333.1-P
Bra037577.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G25140.1	Bra001711.1-P	AT3G18570.1	21798944
AT4G25140.1	Bra022333.1-P	AT3G18570.1	21798944
AT4G25140.1	Bra037577.1-P	AT3G18570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11058	Canola	cytosol	98.37	98.91
AT4G25140.1	Thale cress	cytosol, golgi, plasma membrane	84.24	89.6
Bra010474.1-P	Field mustard	cytosol, golgi, plasma membrane	84.24	86.11
Bra013866.1-P	Field mustard	cytosol, golgi, nucleus	85.33	80.51
VIT_16s0013g00880.t01	Wine grape	plasma membrane	50.0	63.89
GSMUA_Achr1P00500_001	Banana	extracellular, golgi, plasma membrane	40.76	58.14
PGSC0003DMT400055585	Potato	cytosol, endoplasmic reticulum, nucleus, plastid	45.11	56.08
Solyc06g034040.1.1	Tomato	cytosol, golgi, plasma membrane, plastid	44.57	55.78
Bra035733.1-P	Field mustard	plasma membrane	44.57	55.03
Zm00001d027258_P001	Maize	endoplasmic reticulum, extracellular, vacuole	29.35	52.43
KRG92187	Soybean	nucleus	41.85	52.38
KRH34604	Soybean	endoplasmic reticulum	41.3	51.7
Zm00001d002768_P001	Maize	golgi, peroxisome, plasma membrane	41.85	49.36
Os04t0546500-01	Rice	plastid	39.67	49.32
EES12607	Sorghum	golgi, peroxisome, plasma membrane	41.85	48.12
Bra034280.1-P	Field mustard	plasma membrane	38.04	47.95
TraesCS2A01G417500.1	Wheat	golgi	41.85	47.83
TraesCS2D01G414800.1	Wheat	golgi	41.3	47.5
TraesCS2B01G436400.1	Wheat	golgi, peroxisome, plasma membrane	40.22	46.25
KXG40436	Sorghum	cytosol, golgi, plasma membrane	39.67	43.71
HORVU5Hr1G056030.1	Barley	golgi, peroxisome, plasma membrane	38.04	41.92
TraesCS5D01G188400.1	Wheat	golgi, peroxisome, plasma membrane	37.5	41.32
TraesCS5B01G181700.1	Wheat	golgi	37.5	41.32
Os09t0324000-02	Rice	plastid	33.15	38.61
Bra014166.1-P	Field mustard	plastid	26.09	28.92
Bra022333.1-P	Field mustard	golgi, plasma membrane, plastid, vacuole	25.54	28.48
Bra018770.1-P	Field mustard	plastid	24.46	27.95
Bra039071.1-P	Field mustard	golgi, peroxisome, plasma membrane	25.0	24.47
Bra001711.1-P	Field mustard	golgi, plasma membrane, vacuole	23.37	24.43
Bra033021.1-P	Field mustard	golgi, peroxisome, plasma membrane	23.37	22.87
Bra037577.1-P	Field mustard	golgi, plasma membrane, plastid	20.11	22.56
Bra025577.1-P	Field mustard	cytosol, golgi, nucleus	24.46	20.45
Bra028458.1-P	Field mustard	golgi, nucleus, peroxisome	22.83	19.91

Protein Annotations

EnsemblPlants:Bra019186.1	EnsemblPlants:Bra019186.1-P	EnsemblPlantsGene:Bra019186	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005811	GO:GO:0012511	GO:GO:0016020	GO:GO:0016021	InterPro:Oleosin
PANTHER:PTHR33203	PANTHER:PTHR33203:SF7	PFAM:PF01277	ScanProsite:PS00811	SEG:seg	TMHMM:TMhelix
UniParc:UPI00025410C0	UniProt:M4DRP3	MapMan:5.9.2	:	:	:

Description

AT4G25140 (E=8e-065) OLEO1, OLE1 | OLEO1 (OLEOSIN 1)

Coordinates

chrA03:+:25808132..25809828

Molecular Weight (calculated)

20086.0 Da

IEP (calculated)

9.636

GRAVY (calculated)

-0.241

Length

184 amino acids

Sequence
(BLAST)

001: MTDTARTHHD ITTRDPYPMM GRDRDQYAII GRDQYQGYGQ DYSKSRQIAK AATAVTAGGS LLVLSSLTLV GTVIALIVAT PLLVIFSPIL VPALITVALL
101: ITGFLSSGGF GIAAITVFSW IYKYATGEHP KGSDKLDSAR MKLGSKAQDM KDRAHYYGQQ HTGGEHVNTD YRNTDRDRTR GNTT

Best Arabidopsis Sequence Match ( AT4G25140.1 )
(BLAST)

001: MADTARGTHH DIIGRDQYPM MGRDRDQYQM SGRGSDYSKS RQIAKAATAV TAGGSLLVLS SLTLVGTVIA LTVATPLLVI FSPILVPALI TVALLITGFL
101: SSGGFGIAAI TVFSWIYKYA TGEHPQGSDK LDSARMKLGS KAQDLKDRAQ YYGQQHTGGE HDRDRTRGGQ HTT

Arabidopsis Description

OLEO1Oleosin [Source:UniProtKB/TrEMBL;Acc:A0A178V1V3]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.