Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 1
- golgi 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35326 | Canola | plasma membrane | 100.0 | 100.0 |
| CDX77021 | Canola | plasma membrane | 96.58 | 97.24 |
| AT2G25890.2 | Thale cress | mitochondrion | 81.51 | 68.39 |
| VIT_04s0008g00540.t01 | Wine grape | plasma membrane | 57.53 | 57.53 |
| KRH61966 | Soybean | endoplasmic reticulum, nucleus | 54.11 | 47.02 |
| PGSC0003DMT400065474 | Potato | golgi, plasma membrane, vacuole | 42.47 | 44.29 |
| Bra035733.1-P | Field mustard | plasma membrane | 43.15 | 42.28 |
| Bra010474.1-P | Field mustard | cytosol, golgi, plasma membrane | 50.68 | 41.11 |
| Solyc08g066040.1.1 | Tomato | golgi, plasma membrane, plastid | 37.67 | 39.29 |
| Bra019186.1-P | Field mustard | cytosol, golgi, plasma membrane | 47.95 | 38.04 |
| KRH52626 | Soybean | endoplasmic reticulum | 54.79 | 37.74 |
| Bra013866.1-P | Field mustard | cytosol, golgi, nucleus | 49.32 | 36.92 |
| Bra022333.1-P | Field mustard | golgi, plasma membrane, plastid, vacuole | 34.93 | 30.91 |
| Bra014166.1-P | Field mustard | plastid | 34.25 | 30.12 |
| Bra018770.1-P | Field mustard | plastid | 32.88 | 29.81 |
| Bra033021.1-P | Field mustard | golgi, peroxisome, plasma membrane | 37.67 | 29.26 |
| Bra039071.1-P | Field mustard | golgi, peroxisome, plasma membrane | 36.99 | 28.72 |
| Bra037577.1-P | Field mustard | golgi, plasma membrane, plastid | 28.08 | 25.0 |
| Bra025577.1-P | Field mustard | cytosol, golgi, nucleus | 37.67 | 25.0 |
| Bra028458.1-P | Field mustard | golgi, nucleus, peroxisome | 35.62 | 24.64 |
| Bra001711.1-P | Field mustard | golgi, plasma membrane, vacuole | 28.77 | 23.86 |
Protein Annotations
| EnsemblPlants:Bra034280.1 | EnsemblPlants:Bra034280.1-P | EnsemblPlantsGene:Bra034280 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005811 | GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Oleosin |
| PANTHER:PTHR33203 | PANTHER:PTHR33203:SF3 | PFAM:PF01277 | ScanProsite:PS00811 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI00025450E2 | UniProt:M4EZN7 | MapMan:5.9.2 | : | : | : |
Description
AT2G25890 (E=5e-045) | glycine-rich protein / oleosin
Coordinates
chrA04:+:11602158..11602598
Molecular Weight (calculated)
15658.2 Da
IEP (calculated)
8.711
GRAVY (calculated)
0.277
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MADLHQQHQQ PMTRNLHESS SSPSTRQTVR FLTAATIGMS LLVLSGLTLT GTVIGLVVAT PLMVLFSPVL VPAVITMCLL TAGFLFSGGC GVAAATALSW
101: IYRYVTGKHP MGADKVDYAR MMISEKAKEL GHYAQPQTDQ TTTAPY
101: IYRYVTGKHP MGADKVDYAR MMISEKAKEL GHYAQPQTDQ TTTAPY
001: MVSLLKLQKQ HRTLNPYSLR KRKKEMADHQ QHQQQQQPIM RSLHESSPST RQIVRFVTAA TIGLSLLVLS GLTLTGTVIG LIVATPLMVL FSPVLVPAVI
101: TIGLLTMGFL FSGGCGVAAA TALTWIYKYV TGKHPMGADK VDYARMRIAE KAKELGHYTH SQPQQTHQTT TTTH
101: TIGLLTMGFL FSGGCGVAAA TALTWIYKYV TGKHPMGADK VDYARMRIAE KAKELGHYTH SQPQQTHQTT TTTH
Arabidopsis Description
Oleosin [Source:UniProtKB/TrEMBL;Acc:O82308]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.