Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, plastid, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 1
- golgi 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92248 | Canola | golgi, plasma membrane, plastid, vacuole | 98.79 | 98.79 |
| AT3G18570.1 | Thale cress | golgi, peroxisome, plasma membrane, plastid | 80.61 | 80.12 |
| Bra037577.1-P | Field mustard | golgi, plasma membrane, plastid | 74.55 | 75.0 |
| Bra001711.1-P | Field mustard | golgi, plasma membrane, vacuole | 78.79 | 73.86 |
| Bra018770.1-P | Field mustard | plastid | 64.85 | 66.46 |
| Bra014166.1-P | Field mustard | plastid | 63.64 | 63.25 |
| PGSC0003DMT400014323 | Potato | plastid | 58.18 | 57.14 |
| Solyc03g119820.1.1 | Tomato | plastid | 55.76 | 55.76 |
| KRH03819 | Soybean | endoplasmic reticulum, nucleus | 52.12 | 55.13 |
| VIT_17s0000g04210.t01 | Wine grape | plastid | 51.52 | 52.8 |
| KRH56699 | Soybean | endoplasmic reticulum | 52.12 | 52.76 |
| KRH16003 | Soybean | golgi, plasma membrane, vacuole | 46.06 | 52.05 |
| Zm00001d009648_P001 | Maize | plasma membrane | 46.06 | 48.41 |
| PGSC0003DMT400010423 | Potato | golgi, mitochondrion, plasma membrane, plastid | 43.64 | 48.32 |
| GSMUA_Achr3P26330_001 | Banana | plastid | 47.27 | 46.99 |
| EES19991 | Sorghum | golgi, mitochondrion, peroxisome, plastid | 47.27 | 46.71 |
| GSMUA_Achr1P11880_001 | Banana | plastid | 46.67 | 45.83 |
| Solyc06g069260.1.1 | Tomato | plasma membrane, plastid | 42.42 | 45.75 |
| HORVU1Hr1G091010.1 | Barley | cytosol, golgi, plasma membrane | 45.45 | 44.64 |
| TraesCS1A01G415100.1 | Wheat | plasma membrane | 44.85 | 44.31 |
| TraesCS1B01G445100.1 | Wheat | plasma membrane | 44.85 | 44.31 |
| TraesCS1D01G422600.1 | Wheat | plasma membrane | 44.85 | 44.31 |
| Os05t0576700-01 | Rice | plastid | 45.45 | 43.35 |
| Os01t0643900-01 | Rice | golgi, nucleus, plasma membrane | 39.39 | 38.69 |
| OQU87227 | Sorghum | plastid | 41.82 | 35.75 |
| KRH54801 | Soybean | plasma membrane | 41.21 | 35.6 |
| Bra034280.1-P | Field mustard | plasma membrane | 30.91 | 34.93 |
| Zm00001d044080_P001 | Maize | plastid | 38.79 | 34.22 |
| HORVU3Hr1G057690.1 | Barley | plasma membrane | 32.12 | 34.19 |
| Bra035733.1-P | Field mustard | plasma membrane | 24.85 | 27.52 |
| Bra010474.1-P | Field mustard | cytosol, golgi, plasma membrane | 29.7 | 27.22 |
| Bra019186.1-P | Field mustard | cytosol, golgi, plasma membrane | 28.48 | 25.54 |
| Bra013866.1-P | Field mustard | cytosol, golgi, nucleus | 28.48 | 24.1 |
| Bra033021.1-P | Field mustard | golgi, peroxisome, plasma membrane | 27.27 | 23.94 |
| Bra039071.1-P | Field mustard | golgi, peroxisome, plasma membrane | 26.67 | 23.4 |
| Bra028458.1-P | Field mustard | golgi, nucleus, peroxisome | 25.45 | 19.91 |
| Bra025577.1-P | Field mustard | cytosol, golgi, nucleus | 26.06 | 19.55 |
Protein Annotations
| EnsemblPlants:Bra022333.1 | EnsemblPlants:Bra022333.1-P | EnsemblPlantsGene:Bra022333 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Oleosin | PANTHER:PTHR33203 |
| PANTHER:PTHR33203:SF4 | PFAM:PF01277 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002548152 | UniProt:M4E0N6 |
| MapMan:5.9.2 | : | : | : | : | : |
Description
AT3G18570 (E=6e-063) | glycine-rich protein / oleosin
Coordinates
chrA05:+:18330313..18330810
Molecular Weight (calculated)
17933.6 Da
IEP (calculated)
9.712
GRAVY (calculated)
0.339
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MAETFSRGDA QYWPIYGSSN TTERNSPYAS LLRLLRSHSP TSSQLFGLLA LFISGGILLF LLGVTVTAVG IGFVVFLPLI IISSPVWIPV FIGVGGFLSV
101: AGFLVGTLAV VSWAYRYFRG RHPVGSDQMD YARGRIYDTA SHVKDYAREY GGYFHGRAKD AAPGA
101: AGFLVGTLAV VSWAYRYFRG RHPVGSDQMD YARGRIYDTA SHVKDYAREY GGYFHGRAKD AAPGA
001: MAERFSSGEA QYWPNYGSTA TTTVSNSPIS SFFHQLRSHS PTSSQLFGFL ALFISTGILL FLLGVSVTAA VLGFIVFLPL IIISSPIWIP VFVVVGGFLT
101: VSGFLVGTVA LVSWTYRYFR GMHPVGSNQM DYARSRIYDT ASHVKDYARE YGGYFHGRAK DAAPGA
101: VSGFLVGTVA LVSWTYRYFR GMHPVGSNQM DYARSRIYDT ASHVKDYARE YGGYFHGRAK DAAPGA
Arabidopsis Description
Oleosin family protein [Source:UniProtKB/TrEMBL;Acc:Q9LII2]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.