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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 1
  • plastid 3
  • vacuole 2
  • mitochondrion 1
  • golgi 2
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
EpiLoc:vacuole
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plastid
YLoc:plastid
endoplasmic reticulum: 27224218
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH03819 Soybean endoplasmic reticulum, nucleus 88.96 92.95
KRH16003 Soybean golgi, plasma membrane, vacuole 63.8 71.23
VIT_17s0000g04210.t01 Wine grape plastid 65.64 66.46
Solyc03g119820.1.1 Tomato plastid 66.26 65.45
PGSC0003DMT400014323 Potato plastid 66.87 64.88
EES19991 Sorghum golgi, mitochondrion, peroxisome, plastid 58.28 56.89
GSMUA_Achr3P26330_001 Banana plastid 57.06 56.02
Os05t0576700-01 Rice plastid 58.28 54.91
Zm00001d009648_P001 Maize plasma membrane 52.15 54.14
Bra018770.1-P Field mustard plastid 52.15 52.8
AT3G18570.1 Thale cress golgi, peroxisome, plasma membrane, plastid 53.37 52.41
Bra022333.1-P Field mustard golgi, plasma membrane, plastid, vacuole 52.76 52.12
CDX92248 Canola golgi, plasma membrane, plastid, vacuole 52.76 52.12
TraesCS1B01G445100.1 Wheat plasma membrane 53.37 52.1
CDX99345 Canola golgi, plasma membrane, plastid, vacuole 52.15 51.52
TraesCS1D01G422600.1 Wheat plasma membrane 52.76 51.5
HORVU1Hr1G091010.1 Barley cytosol, golgi, plasma membrane 52.76 51.19
TraesCS1A01G415100.1 Wheat plasma membrane 52.15 50.9
Bra014166.1-P Field mustard plastid 51.53 50.6
GSMUA_Achr1P11880_001 Banana plastid 52.15 50.6
AT1G48990.1 Thale cress plastid 51.53 49.7
CDX75969 Canola cytosol, golgi, plasma membrane, plastid 50.31 49.7
CDX82338 Canola golgi, plasma membrane, vacuole 49.69 49.09
PGSC0003DMT400010423 Potato golgi, mitochondrion, plasma membrane, plastid 44.17 48.32
CDX95515 Canola plasma membrane 48.47 48.17
CDY06745 Canola plasma membrane 48.47 48.17
Bra001711.1-P Field mustard golgi, plasma membrane, vacuole 49.69 46.02
CDY18527 Canola golgi, plasma membrane, plastid 46.01 45.73
Bra037577.1-P Field mustard golgi, plasma membrane, plastid 46.01 45.73
Solyc06g069260.1.1 Tomato plasma membrane, plastid 42.33 45.1
KRH54801 Soybean plasma membrane 52.76 45.03
CDX77269 Canola endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid 38.65 45.0
Os01t0643900-01 Rice golgi, nucleus, plasma membrane 39.88 38.69
Zm00001d044080_P001 Maize plastid 41.1 35.83
OQU87227 Sorghum plastid 41.72 35.23
KRH61966 Soybean endoplasmic reticulum, nucleus 36.2 35.12
KRH34604 Soybean endoplasmic reticulum 26.99 29.93
KRG92187 Soybean nucleus 26.99 29.93
KRH52626 Soybean endoplasmic reticulum 36.81 28.3
HORVU3Hr1G057690.1 Barley plasma membrane 26.38 27.74
KRH03243 Soybean golgi, plasma membrane, plastid, vacuole 22.09 22.5
KRG94116 Soybean nucleus 25.77 18.58
KRH07172 Soybean endoplasmic reticulum, nucleus 25.15 18.39
KRH56554 Soybean endoplasmic reticulum, nucleus 21.47 17.68
KRG93234 Soybean nucleus 19.63 16.93
Protein Annotations
EMBL:ACUP02002797EnsemblPlants:KRH56699EnsemblPlantsGene:GLYMA_05G013800EntrezGene:100809872GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0012511GO:GO:0016020GO:GO:0016021
GO:GO:0019915InterPro:OleosinPANTHER:PTHR33203PANTHER:PTHR33203:SF4PFAM:PF01277ProteinID:KRH56699
ProteinID:KRH56699.1TMHMM:TMhelixUniParc:UPI0001BA9112UniProt:I1K198MapMan:5.9.2:
Description
hypothetical protein
Coordinates
chr5:-:1312429..1313494
Molecular Weight (calculated)
17367.2 Da
IEP (calculated)
9.599
GRAVY (calculated)
0.439
Length
163 amino acids
Sequence
(BLAST)
001: MADQYPSPAQ AHRATAPPPS LSAAFLQKLQ DRAPNSTQLA GILPLLVTAS VFLLLTGLTV AGAVLGLIFF LPLIIVSSPV WVPAGTLLFI VTAGFLSVCG
101: FGVALVAALS WMYRYFRGLH PPGSDRVDYA RSRIYDTASH VKDYAREYGG YLQSKVKDAA PGA
Best Arabidopsis Sequence Match ( AT3G18570.1 )
(BLAST)
001: MAERFSSGEA QYWPNYGSTA TTTVSNSPIS SFFHQLRSHS PTSSQLFGFL ALFISTGILL FLLGVSVTAA VLGFIVFLPL IIISSPIWIP VFVVVGGFLT
101: VSGFLVGTVA LVSWTYRYFR GMHPVGSNQM DYARSRIYDT ASHVKDYARE YGGYFHGRAK DAAPGA
Arabidopsis Description
Oleosin family protein [Source:UniProtKB/TrEMBL;Acc:Q9LII2]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.