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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • nucleus 1
  • golgi 2
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:nucleus, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
EpiLoc:nucleus
iPSORT:plastid
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX77269 Canola endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid 80.72 95.71
Bra018770.1-P Field mustard plastid 80.72 83.23
AT1G48990.1 Thale cress plastid 77.71 76.33
Bra022333.1-P Field mustard golgi, plasma membrane, plastid, vacuole 63.25 63.64
PGSC0003DMT400014323 Potato plastid 57.23 56.55
Solyc03g119820.1.1 Tomato plastid 54.82 55.15
Bra037577.1-P Field mustard golgi, plasma membrane, plastid 54.22 54.88
Bra001711.1-P Field mustard golgi, plasma membrane, vacuole 57.23 53.98
KRH03819 Soybean endoplasmic reticulum, nucleus 50.6 53.85
VIT_17s0000g04210.t01 Wine grape plastid 50.0 51.55
KRH56699 Soybean endoplasmic reticulum 50.6 51.53
PGSC0003DMT400010423 Potato golgi, mitochondrion, plasma membrane, plastid 42.77 47.65
GSMUA_Achr3P26330_001 Banana plastid 47.59 47.59
EES19991 Sorghum golgi, mitochondrion, peroxisome, plastid 46.39 46.11
KRH16003 Soybean golgi, plasma membrane, vacuole 40.36 45.89
Zm00001d009648_P001 Maize plasma membrane 43.37 45.86
Solyc06g069260.1.1 Tomato plasma membrane, plastid 40.96 44.44
Os05t0576700-01 Rice plastid 45.18 43.35
GSMUA_Achr1P11880_001 Banana plastid 41.57 41.07
TraesCS1A01G415100.1 Wheat plasma membrane 39.76 39.52
TraesCS1B01G445100.1 Wheat plasma membrane 39.76 39.52
TraesCS1D01G422600.1 Wheat plasma membrane 39.76 39.52
HORVU1Hr1G091010.1 Barley cytosol, golgi, plasma membrane 39.76 39.29
KRH54801 Soybean plasma membrane 45.18 39.27
Bra034280.1-P Field mustard plasma membrane 30.12 34.25
OQU87227 Sorghum plastid 33.13 28.5
Os01t0643900-01 Rice golgi, nucleus, plasma membrane 28.31 27.98
Bra010474.1-P Field mustard cytosol, golgi, plasma membrane 29.52 27.22
Zm00001d044080_P001 Maize plastid 30.12 26.74
Bra019186.1-P Field mustard cytosol, golgi, plasma membrane 28.92 26.09
Bra013866.1-P Field mustard cytosol, golgi, nucleus 27.71 23.59
Bra035733.1-P Field mustard plasma membrane 21.08 23.49
HORVU3Hr1G057690.1 Barley plasma membrane 21.69 23.23
Bra033021.1-P Field mustard golgi, peroxisome, plasma membrane 25.9 22.87
Bra039071.1-P Field mustard golgi, peroxisome, plasma membrane 25.3 22.34
Bra025577.1-P Field mustard cytosol, golgi, nucleus 25.3 19.09
Bra028458.1-P Field mustard golgi, nucleus, peroxisome 24.1 18.96
Protein Annotations
EnsemblPlants:Bra014166.1EnsemblPlants:Bra014166.1-PEnsemblPlantsGene:Bra014166GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0012511GO:GO:0016020GO:GO:0016021InterPro:OleosinPANTHER:PTHR33203
PANTHER:PTHR33203:SF4PFAM:PF01277SEG:segTMHMM:TMhelixUniParc:UPI0002546547UniProt:M4DCF2
MapMan:5.9.2:::::
Description
AT1G48990 (E=5e-042) | glycine-rich protein / oleosin
Coordinates
chrA08:-:2868135..2868635
Molecular Weight (calculated)
18347.4 Da
IEP (calculated)
10.249
GRAVY (calculated)
0.331
Length
166 amino acids
Sequence
(BLAST)
001: MADRTSPSHI QQRPYGSTIA PPRGNNINHP IASFLRQLQS QSPEHSRQRF GLLVFFISGG ILLLLTGITV TAFVLGFIAF LPIIIISSPI WIPLFLLVTG
101: FLSVAGFLFS TAVVMSWMYR YFKGMHPVGS EQVDYARSRI YDTAAHVKDY AGGYFHGKLK DVAPGA
Best Arabidopsis Sequence Match ( AT1G48990.1 )
(BLAST)
001: MADRTNPSSH TQQRPIYNST TVPRSNTTTN HPLSSLLRQL LQSQSPNHSG QLFGFLAFFI SGGILLLLTG ITVTAFVLGF IAFLPLIIIS SPIWIPLFLI
101: VTGFLSLAGL ILATGAVVSW LYRYFKGMHP LRSDQVDYAR SRIHDTAAHV KDYAGGYFHG TLKDAAPGA
Arabidopsis Description
F27J15.22 [Source:UniProtKB/TrEMBL;Acc:Q9M9A1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.