Factsheet for TraesCS1D01G422600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, plasma membrane
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G445100.1	Wheat	plasma membrane	98.2	98.2
TraesCS1A01G415100.1	Wheat	plasma membrane	98.2	98.2
HORVU1Hr1G091010.1	Barley	cytosol, golgi, plasma membrane	94.01	93.45
GSMUA_Achr3P26330_001	Banana	plastid	59.28	59.64
KRH03819	Soybean	endoplasmic reticulum, nucleus	50.9	54.49
GSMUA_Achr1P11880_001	Banana	plastid	53.89	53.57
VIT_17s0000g04210.t01	Wine grape	plastid	50.9	52.8
KRH56699	Soybean	endoplasmic reticulum	51.5	52.76
PGSC0003DMT400014323	Potato	plastid	52.69	52.38
Solyc03g119820.1.1	Tomato	plastid	51.5	52.12
Os01t0643900-01	Rice	golgi, nucleus, plasma membrane	49.7	49.4
PGSC0003DMT400010423	Potato	golgi, mitochondrion, plasma membrane, plastid	42.52	47.65
Solyc06g069260.1.1	Tomato	plasma membrane, plastid	41.32	45.1
CDX92248	Canola	golgi, plasma membrane, plastid, vacuole	44.31	44.85
Bra022333.1-P	Field mustard	golgi, plasma membrane, plastid, vacuole	44.31	44.85
OQU87227	Sorghum	plastid	51.5	44.56
KRH16003	Soybean	golgi, plasma membrane, vacuole	38.92	44.52
CDX99345	Canola	golgi, plasma membrane, plastid, vacuole	43.11	43.64
Zm00001d044080_P001	Maize	plastid	47.9	42.78
AT3G18570.1	Thale cress	golgi, peroxisome, plasma membrane, plastid	41.92	42.17
CDX82338	Canola	golgi, plasma membrane, vacuole	41.32	41.82
CDX75969	Canola	cytosol, golgi, plasma membrane, plastid	41.32	41.82
Bra018770.1-P	Field mustard	plastid	40.12	41.61
CDY06745	Canola	plasma membrane	40.72	41.46
CDX95515	Canola	plasma membrane	40.72	41.46
AT1G48990.1	Thale cress	plastid	41.32	40.83
Bra037577.1-P	Field mustard	golgi, plasma membrane, plastid	39.52	40.24
Bra014166.1-P	Field mustard	plastid	39.52	39.76
CDY18527	Canola	golgi, plasma membrane, plastid	38.32	39.02
Bra001711.1-P	Field mustard	golgi, plasma membrane, vacuole	40.72	38.64
KRH54801	Soybean	plasma membrane	39.52	34.55
CDX77269	Canola	endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid	28.14	33.57
TraesCS2D01G414800.1	Wheat	golgi	31.14	32.5
TraesCS5D01G188400.1	Wheat	golgi, peroxisome, plasma membrane	26.35	26.35

Protein Annotations

EnsemblPlants:TraesCS1D01G422600.1	EnsemblPlantsGene:TraesCS1D01G422600	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0012511	GO:GO:0016020	GO:GO:0016021	InterPro:Oleosin	PANTHER:PTHR33203	PANTHER:PTHR33203:SF4
PFAM:PF01277	SEG:seg	TMHMM:TMhelix	MapMan:5.9.2	:	:

Description

No Description!

Coordinates

chr1D:-:478116500..478117003

Molecular Weight (calculated)

17497.2 Da

IEP (calculated)

10.402

GRAVY (calculated)

0.379

Length

167 amino acids

Sequence
(BLAST)

001: MADRHGEGGV ASARRPGRTD LDDPSTTLLQ RVQAHLPNAT QVVGLLTLLL AGAALLVLAG LTFTGAVVAL VFLGPLALLT SPIWVPFSFA LLVVAVAALS
101: FVGFAVAALA AATWAYRYFT GRHPVGADRV DRARSRLADT ASHVKDYARR EYGGYLGNRT KDAAPGA

Best Arabidopsis Sequence Match ( AT3G18570.1 )
(BLAST)

001: MAERFSSGEA QYWPNYGSTA TTTVSNSPIS SFFHQLRSHS PTSSQLFGFL ALFISTGILL FLLGVSVTAA VLGFIVFLPL IIISSPIWIP VFVVVGGFLT
101: VSGFLVGTVA LVSWTYRYFR GMHPVGSNQM DYARSRIYDT ASHVKDYARE YGGYFHGRAK DAAPGA

Arabidopsis Description

Oleosin family protein [Source:UniProtKB/TrEMBL;Acc:Q9LII2]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.