Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 1
- golgi 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400014323 | Potato | plastid | 96.36 | 94.64 |
| VIT_17s0000g04210.t01 | Wine grape | plastid | 68.48 | 70.19 |
| KRH03819 | Soybean | endoplasmic reticulum, nucleus | 64.24 | 67.95 |
| KRH56699 | Soybean | endoplasmic reticulum | 65.45 | 66.26 |
| GSMUA_Achr3P26330_001 | Banana | plastid | 61.82 | 61.45 |
| KRH16003 | Soybean | golgi, plasma membrane, vacuole | 53.94 | 60.96 |
| GSMUA_Achr1P11880_001 | Banana | plastid | 60.0 | 58.93 |
| EES19991 | Sorghum | golgi, mitochondrion, peroxisome, plastid | 58.18 | 57.48 |
| Zm00001d009648_P001 | Maize | plasma membrane | 54.55 | 57.32 |
| Bra018770.1-P | Field mustard | plastid | 55.76 | 57.14 |
| Os05t0576700-01 | Rice | plastid | 58.79 | 56.07 |
| CDX92248 | Canola | golgi, plasma membrane, plastid, vacuole | 55.76 | 55.76 |
| CDX99345 | Canola | golgi, plasma membrane, plastid, vacuole | 55.76 | 55.76 |
| Bra022333.1-P | Field mustard | golgi, plasma membrane, plastid, vacuole | 55.76 | 55.76 |
| AT1G48990.1 | Thale cress | plastid | 56.97 | 55.62 |
| Bra014166.1-P | Field mustard | plastid | 55.15 | 54.82 |
| Solyc06g069260.1.1 | Tomato | plasma membrane, plastid | 50.3 | 54.25 |
| AT3G18570.1 | Thale cress | golgi, peroxisome, plasma membrane, plastid | 53.94 | 53.61 |
| HORVU1Hr1G091010.1 | Barley | cytosol, golgi, plasma membrane | 53.33 | 52.38 |
| CDX77269 | Canola | endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid | 44.24 | 52.14 |
| TraesCS1B01G445100.1 | Wheat | plasma membrane | 52.12 | 51.5 |
| TraesCS1D01G422600.1 | Wheat | plasma membrane | 52.12 | 51.5 |
| CDY06745 | Canola | plasma membrane | 50.91 | 51.22 |
| CDX95515 | Canola | plasma membrane | 50.91 | 51.22 |
| CDX82338 | Canola | golgi, plasma membrane, vacuole | 50.91 | 50.91 |
| CDX75969 | Canola | cytosol, golgi, plasma membrane, plastid | 50.91 | 50.91 |
| TraesCS1A01G415100.1 | Wheat | plasma membrane | 51.52 | 50.9 |
| Bra037577.1-P | Field mustard | golgi, plasma membrane, plastid | 49.7 | 50.0 |
| CDY18527 | Canola | golgi, plasma membrane, plastid | 49.7 | 50.0 |
| Bra001711.1-P | Field mustard | golgi, plasma membrane, vacuole | 50.3 | 47.16 |
| KRH54801 | Soybean | plasma membrane | 50.3 | 43.46 |
| Solyc06g034040.1.1 | Tomato | cytosol, golgi, plasma membrane, plastid | 34.55 | 38.78 |
| OQU87227 | Sorghum | plastid | 44.85 | 38.34 |
| Os01t0643900-01 | Rice | golgi, nucleus, plasma membrane | 38.79 | 38.1 |
| Zm00001d044080_P001 | Maize | plastid | 40.61 | 35.83 |
| Solyc06g060840.1.1 | Tomato | plastid | 27.27 | 33.58 |
| Solyc08g078160.2.1 | Tomato | mitochondrion | 27.88 | 32.86 |
| Solyc02g086490.2.1 | Tomato | extracellular | 28.48 | 31.54 |
| Solyc03g112440.1.1 | Tomato | golgi, plasma membrane, plastid | 29.09 | 31.37 |
| HORVU3Hr1G057690.1 | Barley | plasma membrane | 29.09 | 30.97 |
| Solyc12g010920.1.1 | Tomato | cytosol, golgi, plasma membrane | 31.52 | 30.23 |
| Solyc08g066040.1.1 | Tomato | golgi, plasma membrane, plastid | 24.85 | 29.29 |
Protein Annotations
| EnsemblPlants:Solyc03g119820.1.1 | EnsemblPlantsGene:Solyc03g119820.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019915 | InterPro:Oleosin |
| PANTHER:PTHR33203 | PANTHER:PTHR33203:SF4 | PFAM:PF01277 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00027667BB |
| UniProt:K4BMD1 | MapMan:5.9.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:68391382..68391879
Molecular Weight (calculated)
17952.9 Da
IEP (calculated)
10.073
GRAVY (calculated)
0.305
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQQPNYGR PQRLPTRSSG FNTTPSFLRK LQEHVPNSTQ LVGFLTLIIS GGILLLLTGL TLTTIILGLI FFTPLVLISS PIWVPVGTVL FIAIAGFLSV
101: CGFGVATLAS LSWLYRYIRG FHPPGSDRVD YARSRIADTA SHVKDYAREY GGYLHSKVKD AAPGA
101: CGFGVATLAS LSWLYRYIRG FHPPGSDRVD YARSRIADTA SHVKDYAREY GGYLHSKVKD AAPGA
001: MAERFSSGEA QYWPNYGSTA TTTVSNSPIS SFFHQLRSHS PTSSQLFGFL ALFISTGILL FLLGVSVTAA VLGFIVFLPL IIISSPIWIP VFVVVGGFLT
101: VSGFLVGTVA LVSWTYRYFR GMHPVGSNQM DYARSRIYDT ASHVKDYARE YGGYFHGRAK DAAPGA
101: VSGFLVGTVA LVSWTYRYFR GMHPVGSNQM DYARSRIYDT ASHVKDYARE YGGYFHGRAK DAAPGA
Arabidopsis Description
Oleosin family protein [Source:UniProtKB/TrEMBL;Acc:Q9LII2]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.