Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99345 | Canola | golgi, plasma membrane, plastid, vacuole | 80.12 | 80.61 |
| Bra022333.1-P | Field mustard | golgi, plasma membrane, plastid, vacuole | 80.12 | 80.61 |
| CDX92248 | Canola | golgi, plasma membrane, plastid, vacuole | 79.52 | 80.0 |
| CDX82338 | Canola | golgi, plasma membrane, vacuole | 77.71 | 78.18 |
| CDX75969 | Canola | cytosol, golgi, plasma membrane, plastid | 77.71 | 78.18 |
| CDY06745 | Canola | plasma membrane | 74.7 | 75.61 |
| CDX95515 | Canola | plasma membrane | 74.7 | 75.61 |
| CDY18527 | Canola | golgi, plasma membrane, plastid | 73.49 | 74.39 |
| Bra037577.1-P | Field mustard | golgi, plasma membrane, plastid | 73.49 | 74.39 |
| Bra001711.1-P | Field mustard | golgi, plasma membrane, vacuole | 76.51 | 72.16 |
| AT1G48990.1 | Thale cress | plastid | 64.46 | 63.31 |
| PGSC0003DMT400014323 | Potato | plastid | 56.63 | 55.95 |
| KRH03819 | Soybean | endoplasmic reticulum, nucleus | 51.2 | 54.49 |
| Solyc03g119820.1.1 | Tomato | plastid | 53.61 | 53.94 |
| VIT_17s0000g04210.t01 | Wine grape | plastid | 51.81 | 53.42 |
| KRH56699 | Soybean | endoplasmic reticulum | 52.41 | 53.37 |
| KRH16003 | Soybean | golgi, plasma membrane, vacuole | 46.39 | 52.74 |
| GSMUA_Achr3P26330_001 | Banana | plastid | 46.99 | 46.99 |
| PGSC0003DMT400010423 | Potato | golgi, mitochondrion, plasma membrane, plastid | 42.17 | 46.98 |
| Solyc06g069260.1.1 | Tomato | plasma membrane, plastid | 42.17 | 45.75 |
| GSMUA_Achr1P11880_001 | Banana | plastid | 45.78 | 45.24 |
| Zm00001d009648_P001 | Maize | plasma membrane | 41.57 | 43.95 |
| Os05t0576700-01 | Rice | plastid | 45.78 | 43.93 |
| EES19991 | Sorghum | golgi, mitochondrion, peroxisome, plastid | 43.98 | 43.71 |
| HORVU1Hr1G091010.1 | Barley | cytosol, golgi, plasma membrane | 43.37 | 42.86 |
| TraesCS1A01G415100.1 | Wheat | plasma membrane | 42.17 | 41.92 |
| TraesCS1D01G422600.1 | Wheat | plasma membrane | 42.17 | 41.92 |
| TraesCS1B01G445100.1 | Wheat | plasma membrane | 42.17 | 41.92 |
| Os01t0643900-01 | Rice | golgi, nucleus, plasma membrane | 38.55 | 38.1 |
| KRH54801 | Soybean | plasma membrane | 40.96 | 35.6 |
| OQU87227 | Sorghum | plastid | 39.16 | 33.68 |
| Zm00001d044080_P001 | Maize | plastid | 36.14 | 32.09 |
| HORVU3Hr1G057690.1 | Barley | plasma membrane | 28.31 | 30.32 |
| AT2G25890.2 | Thale cress | mitochondrion | 27.71 | 26.44 |
| AT4G25140.1 | Thale cress | cytosol, golgi, plasma membrane | 27.11 | 26.01 |
| AT5G51210.1 | Thale cress | cytosol, golgi, plasma membrane | 21.69 | 25.53 |
| AT5G40420.1 | Thale cress | cytosol | 26.51 | 22.11 |
| AT3G27660.1 | Thale cress | cytosol, golgi, plasma membrane | 25.3 | 21.99 |
| AT3G01570.1 | Thale cress | plasma membrane | 21.69 | 19.67 |
Protein Annotations
| MapMan:5.9.2 | EntrezGene:821388 | UniProt:A0A178VEU5 | ProteinID:AEE76118.1 | ArrayExpress:AT3G18570 | EnsemblPlantsGene:AT3G18570 |
| RefSeq:AT3G18570 | TAIR:AT3G18570 | RefSeq:AT3G18570-TAIR-G | EnsemblPlants:AT3G18570.1 | TAIR:AT3G18570.1 | ProteinID:BAB02215.1 |
| EMBL:BT004094 | EMBL:BT004958 | GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0008150 | GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019915 |
| RefSeq:NP_188487.1 | ProteinID:OAP03463.1 | InterPro:Oleosin | PFAM:PF01277 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR33203 | PANTHER:PTHR33203:SF4 | UniProt:Q9LII2 | TMHMM:TMhelix | UniParc:UPI000000C279 | SEG:seg |
Description
Oleosin family protein [Source:UniProtKB/TrEMBL;Acc:Q9LII2]
Coordinates
chr3:-:6395790..6396624
Molecular Weight (calculated)
18135.8 Da
IEP (calculated)
9.553
GRAVY (calculated)
0.393
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MAERFSSGEA QYWPNYGSTA TTTVSNSPIS SFFHQLRSHS PTSSQLFGFL ALFISTGILL FLLGVSVTAA VLGFIVFLPL IIISSPIWIP VFVVVGGFLT
101: VSGFLVGTVA LVSWTYRYFR GMHPVGSNQM DYARSRIYDT ASHVKDYARE YGGYFHGRAK DAAPGA
101: VSGFLVGTVA LVSWTYRYFR GMHPVGSNQM DYARSRIYDT ASHVKDYARE YGGYFHGRAK DAAPGA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.