Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06745 | Canola | plasma membrane | 100.0 | 100.0 |
| CDY18527 | Canola | golgi, plasma membrane, plastid | 90.85 | 90.85 |
| CDX99345 | Canola | golgi, plasma membrane, plastid, vacuole | 78.05 | 77.58 |
| CDX92248 | Canola | golgi, plasma membrane, plastid, vacuole | 77.44 | 76.97 |
| AT3G18570.1 | Thale cress | golgi, peroxisome, plasma membrane, plastid | 75.61 | 74.7 |
| CDX82338 | Canola | golgi, plasma membrane, vacuole | 72.56 | 72.12 |
| CDX75969 | Canola | cytosol, golgi, plasma membrane, plastid | 71.95 | 71.52 |
| PGSC0003DMT400014323 | Potato | plastid | 53.05 | 51.79 |
| Solyc03g119820.1.1 | Tomato | plastid | 51.22 | 50.91 |
| CDX77269 | Canola | endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid | 43.29 | 50.71 |
| KRH03819 | Soybean | endoplasmic reticulum, nucleus | 47.56 | 50.0 |
| VIT_17s0000g04210.t01 | Wine grape | plastid | 48.17 | 49.07 |
| KRH56699 | Soybean | endoplasmic reticulum | 48.17 | 48.47 |
| KRH16003 | Soybean | golgi, plasma membrane, vacuole | 42.68 | 47.95 |
| Zm00001d009648_P001 | Maize | plasma membrane | 42.68 | 44.59 |
| GSMUA_Achr3P26330_001 | Banana | plastid | 44.51 | 43.98 |
| PGSC0003DMT400010423 | Potato | golgi, mitochondrion, plasma membrane, plastid | 39.63 | 43.62 |
| EES19991 | Sorghum | golgi, mitochondrion, peroxisome, plastid | 43.9 | 43.11 |
| Solyc06g069260.1.1 | Tomato | plasma membrane, plastid | 39.63 | 42.48 |
| Os05t0576700-01 | Rice | plastid | 44.51 | 42.2 |
| HORVU1Hr1G091010.1 | Barley | cytosol, golgi, plasma membrane | 42.68 | 41.67 |
| GSMUA_Achr1P11880_001 | Banana | plastid | 42.68 | 41.67 |
| TraesCS1B01G445100.1 | Wheat | plasma membrane | 41.46 | 40.72 |
| TraesCS1A01G415100.1 | Wheat | plasma membrane | 41.46 | 40.72 |
| TraesCS1D01G422600.1 | Wheat | plasma membrane | 41.46 | 40.72 |
| Os01t0643900-01 | Rice | golgi, nucleus, plasma membrane | 34.76 | 33.93 |
| OQU87227 | Sorghum | plastid | 37.2 | 31.61 |
| KRH54801 | Soybean | plasma membrane | 35.98 | 30.89 |
| Zm00001d044080_P001 | Maize | plastid | 34.76 | 30.48 |
| CDX77021 | Canola | plasma membrane | 26.22 | 29.66 |
| CDY35326 | Canola | plasma membrane | 26.22 | 29.45 |
| HORVU3Hr1G057690.1 | Barley | plasma membrane | 25.61 | 27.1 |
| CDX71696 | Canola | cytosol | 21.95 | 24.16 |
| CDY03377 | Canola | cytosol | 23.78 | 22.94 |
| CDY05844 | Canola | cytosol | 20.73 | 22.82 |
| CDY24856 | Canola | cytosol | 25.0 | 22.78 |
| CDY11058 | Canola | cytosol | 25.0 | 22.4 |
| CDY34345 | Canola | cytosol | 23.17 | 22.35 |
| CDY08967 | Canola | cytosol, golgi, plasma membrane | 24.39 | 22.35 |
| CDX92679 | Canola | cytosol | 25.0 | 22.04 |
| CDY49771 | Canola | cytosol | 22.56 | 19.68 |
| CDY03988 | Canola | cytosol, endoplasmic reticulum, golgi | 21.95 | 18.85 |
| CDY20040 | Canola | cytosol | 21.34 | 18.62 |
| CDX67456 | Canola | cytosol | 21.95 | 18.0 |
| CDY11685 | Canola | cytosol | 21.95 | 18.0 |
| CDY50118 | Canola | cytosol | 21.34 | 15.28 |
Protein Annotations
| EnsemblPlants:CDX95515 | EnsemblPlantsGene:GSBRNA2T00101325001 | GO:A0A078EXG1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Oleosin | PANTHER:PTHR33203 |
| PANTHER:PTHR33203:SF4 | PFAM:PF01277 | ProteinID:CDX95515 | ProteinID:CDX95515.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EC78B2 | MapMan:5.9.2 | : | : | : | : |
Description
BnaC01g34070D
Coordinates
chrLK031889:+:879520..880014
Molecular Weight (calculated)
17865.6 Da
IEP (calculated)
9.227
GRAVY (calculated)
0.347
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MAETLSTGES RYWPIYGSNT TERNIPYASL LRLLRYHSPT SSHLFGFLAL LISGGLLTFL LGVTVTATAF GFIAFLPLII ISGPIWLPGS VLVGGCLTVV
101: GFLVGTVAIV SWTYRYFRGM HLAGSDQMDY ARGRIYDTAS HVKDYAREYG GYFHGRAKDA APGA
101: GFLVGTVAIV SWTYRYFRGM HLAGSDQMDY ARGRIYDTAS HVKDYAREYG GYFHGRAKDA APGA
001: MAERFSSGEA QYWPNYGSTA TTTVSNSPIS SFFHQLRSHS PTSSQLFGFL ALFISTGILL FLLGVSVTAA VLGFIVFLPL IIISSPIWIP VFVVVGGFLT
101: VSGFLVGTVA LVSWTYRYFR GMHPVGSNQM DYARSRIYDT ASHVKDYARE YGGYFHGRAK DAAPGA
101: VSGFLVGTVA LVSWTYRYFR GMHPVGSNQM DYARSRIYDT ASHVKDYARE YGGYFHGRAK DAAPGA
Arabidopsis Description
Oleosin family protein [Source:UniProtKB/TrEMBL;Acc:Q9LII2]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.