CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, plasma membrane, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034280.1-P	Field mustard	plasma membrane	97.24	96.58
CDY35326	Canola	plasma membrane	97.24	96.58
AT2G25890.2	Thale cress	mitochondrion	78.62	65.52
VIT_04s0008g00540.t01	Wine grape	plasma membrane	55.86	55.48
KRH61966	Soybean	endoplasmic reticulum, nucleus	53.1	45.83
PGSC0003DMT400065474	Potato	golgi, plasma membrane, vacuole	40.69	42.14
CDY05844	Canola	cytosol	42.76	41.61
CDX71696	Canola	cytosol	42.07	40.94
CDY34345	Canola	cytosol	47.59	40.59
CDY03377	Canola	cytosol	47.59	40.59
CDY24856	Canola	cytosol	49.66	40.0
CDY08967	Canola	cytosol, golgi, plasma membrane	48.28	39.11
CDY11058	Canola	cytosol	48.97	38.8
Solyc08g066040.1.1	Tomato	golgi, plasma membrane, plastid	37.24	38.57
CDX92679	Canola	cytosol	48.28	37.63
KRH52626	Soybean	endoplasmic reticulum	53.79	36.79
CDX77269	Canola	endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid	32.41	33.57
CDX99345	Canola	golgi, plasma membrane, plastid, vacuole	35.86	31.52
CDX92248	Canola	golgi, plasma membrane, plastid, vacuole	35.86	31.52
CDY49771	Canola	cytosol	37.24	28.72
CDY20040	Canola	cytosol	35.86	27.66
CDY03988	Canola	cytosol, endoplasmic reticulum, golgi	35.86	27.23
CDX75969	Canola	cytosol, golgi, plasma membrane, plastid	30.34	26.67
CDY06745	Canola	plasma membrane	29.66	26.22
CDX95515	Canola	plasma membrane	29.66	26.22
CDX82338	Canola	golgi, plasma membrane, vacuole	29.66	26.06
CDX67456	Canola	cytosol	34.48	25.0
CDY18527	Canola	golgi, plasma membrane, plastid	28.28	25.0
CDY11685	Canola	cytosol	34.48	25.0
CDY50118	Canola	cytosol	34.48	21.83

Protein Annotations

EnsemblPlants:CDX77021	EnsemblPlantsGene:GSBRNA2T00127589001	GO:A0A078CIN9	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005811	GO:GO:0012511	GO:GO:0016020	GO:GO:0016021	InterPro:Oleosin
PANTHER:PTHR33203	PANTHER:PTHR33203:SF3	PFAM:PF01277	ProteinID:CDX77021	ProteinID:CDX77021.1	ScanProsite:PS00811
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EDB9E4	MapMan:5.9.2	:	:

Description

BnaC04g38160D

Coordinates

chrLK031809:+:507470..507907

Molecular Weight (calculated)

15568.1 Da

IEP (calculated)

8.239

GRAVY (calculated)

0.334

Length

145 amino acids

Sequence
(BLAST)

001: MADLHQHQQP MTRNLHESSS SPSTRQTVRF LTAATIGMSL LVLSGLTLTG TVIGLVVATP LMVLFSPVLV PAVITMCLLT AGFLFSGGCG VAAATALSWI
101: YRYVTGKHPM GADKVDYARV MISDKAKELE HYAQPQTDQT TIAPY

Best Arabidopsis Sequence Match ( AT2G25890.2 )
(BLAST)

001: MVSLLKLQKQ HRTLNPYSLR KRKKEMADHQ QHQQQQQPIM RSLHESSPST RQIVRFVTAA TIGLSLLVLS GLTLTGTVIG LIVATPLMVL FSPVLVPAVI
101: TIGLLTMGFL FSGGCGVAAA TALTWIYKYV TGKHPMGADK VDYARMRIAE KAKELGHYTH SQPQQTHQTT TTTH

Arabidopsis Description

Oleosin [Source:UniProtKB/TrEMBL;Acc:O82308]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.