Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
cytosol:
21803444
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025577.1-P | Field mustard | cytosol, golgi, nucleus | 88.21 | 91.82 |
| CDX67456 | Canola | cytosol | 72.93 | 83.5 |
| CDY11685 | Canola | cytosol | 72.49 | 83.0 |
| AT5G40420.1 | Thale cress | cytosol | 70.31 | 80.9 |
| CDY20040 | Canola | cytosol | 51.97 | 63.3 |
| CDY49771 | Canola | cytosol | 50.66 | 61.7 |
| CDY03988 | Canola | cytosol, endoplasmic reticulum, golgi | 50.22 | 60.21 |
| GSMUA_AchrUn_... | Banana | cytosol, golgi, plasma membrane | 31.88 | 48.99 |
| Solyc02g086490.2.1 | Tomato | extracellular | 31.0 | 47.65 |
| VIT_14s0066g00700.t01 | Wine grape | golgi, plasma membrane, plastid, vacuole | 27.95 | 45.71 |
| PGSC0003DMT400032872 | Potato | cytosol, golgi, plastid | 31.88 | 43.98 |
| Solyc12g010920.1.1 | Tomato | cytosol, golgi, plasma membrane | 32.75 | 43.6 |
| VIT_14s0066g00710.t01 | Wine grape | golgi, plasma membrane, plastid | 27.07 | 39.49 |
| Os03t0699000-01 | Rice | plastid | 28.82 | 38.37 |
| Zm00001d033612_P001 | Maize | cytosol, golgi, plasma membrane | 28.82 | 37.5 |
| KRG93234 | Soybean | nucleus | 30.13 | 36.51 |
| CDY35326 | Canola | plasma membrane | 22.71 | 35.62 |
| CDX77021 | Canola | plasma membrane | 21.83 | 34.48 |
| Zm00001d013494_P001 | Maize | cytosol | 27.95 | 34.41 |
| KRG94116 | Soybean | nucleus | 32.75 | 33.19 |
| KRH07172 | Soybean | endoplasmic reticulum, nucleus | 31.88 | 32.74 |
| KRH56554 | Soybean | endoplasmic reticulum, nucleus | 27.95 | 32.32 |
| GSMUA_Achr4P13900_001 | Banana | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 26.2 | 31.58 |
| CDY05844 | Canola | cytosol | 19.65 | 30.2 |
| CDX71696 | Canola | cytosol | 19.21 | 29.53 |
| HORVU4Hr1G005800.1 | Barley | plastid | 29.69 | 28.45 |
| CDX82338 | Canola | golgi, plasma membrane, vacuole | 19.21 | 26.67 |
| KXG37789 | Sorghum | plastid | 29.69 | 26.36 |
| CDX75969 | Canola | cytosol, golgi, plasma membrane, plastid | 18.78 | 26.06 |
| CDX99345 | Canola | golgi, plasma membrane, plastid, vacuole | 18.34 | 25.45 |
| CDX92248 | Canola | golgi, plasma membrane, plastid, vacuole | 18.34 | 25.45 |
| CDY34345 | Canola | cytosol | 18.78 | 25.29 |
| CDY03377 | Canola | cytosol | 17.9 | 24.12 |
| CDY11058 | Canola | cytosol | 19.21 | 24.04 |
| CDY24856 | Canola | cytosol | 18.78 | 23.89 |
| CDX92679 | Canola | cytosol | 19.21 | 23.66 |
| CDX77269 | Canola | endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid | 14.41 | 23.57 |
| CDY08967 | Canola | cytosol, golgi, plasma membrane | 18.34 | 23.46 |
| CDY06745 | Canola | plasma membrane | 15.28 | 21.34 |
| CDX95515 | Canola | plasma membrane | 15.28 | 21.34 |
| CDY18527 | Canola | golgi, plasma membrane, plastid | 13.97 | 19.51 |
Protein Annotations
| EnsemblPlants:CDY50118 | EnsemblPlantsGene:GSBRNA2T00095929001 | GO:A0A078IM60 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005811 | GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Oleosin |
| PANTHER:PTHR33203 | PANTHER:PTHR33203:SF16 | PFAM:PF01277 | ProteinID:CDY50118 | ProteinID:CDY50118.1 | ScanProsite:PS00811 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EF2598 | UniProt:A0A078IM60 | MapMan:5.9.2 | : |
Description
BnaC04g32530DOleosin [Source:UniProtKB/TrEMBL;Acc:A0A078IM60]
Coordinates
chrLK032882:-:34363..35807
Molecular Weight (calculated)
24576.6 Da
IEP (calculated)
9.687
GRAVY (calculated)
-0.111
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MADTHRVDRT DRHLQFQSPY EGGRVNIQFE GAGEGYGQSG YGGGGGYGQS GYGGGGYKSM MPEIYIYSLT FMHTKLMRFF LGPNKTFPIV GSLLAIAGLL
101: LAGSVIGLMI SIPLFLLFSP VIVPAAITIG LATTGFLASG MFGLTGLSSI SWVMNYLRRT RGGVPDQLEY AKRRMADAVG YAGQKGKEMG QFVQDKAHDA
201: KQYDISKPQD TTTTTTTTTK GHETRTAAA
101: LAGSVIGLMI SIPLFLLFSP VIVPAAITIG LATTGFLASG MFGLTGLSSI SWVMNYLRRT RGGVPDQLEY AKRRMADAVG YAGQKGKEMG QFVQDKAHDA
201: KQYDISKPQD TTTTTTTTTK GHETRTAAA
001: MADTHRVDRT DRHFQFQSPY EGGRGQGQYE GDRGYGGGGY KSMMPESGPS STQVLSLLIG VPVVGSLLAL AGLLLAGSVI GLMVALPLFL LFSPVIVPAA
101: LTIGLAMTGF LASGMFGLTG LSSISWVMNY LRGTRRTVPE QLEYAKRRMA DAVGYAGQKG KEMGQHVQNK AQDVKQYDIS KPHDTTTKGH ETQGRTTAA
101: LTIGLAMTGF LASGMFGLTG LSSISWVMNY LRGTRRTVPE QLEYAKRRMA DAVGYAGQKG KEMGQHVQNK AQDVKQYDIS KPHDTTTKGH ETQGRTTAA
Arabidopsis Description
OLEO2Oleosin 21.2 kDa [Source:UniProtKB/Swiss-Prot;Acc:Q39165]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.