Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
cytosol:
21803444
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019186.1-P | Field mustard | cytosol, golgi, plasma membrane | 98.91 | 98.37 |
| CDY03377 | Canola | cytosol | 84.15 | 90.59 |
| AT4G25140.1 | Thale cress | cytosol, golgi, plasma membrane | 85.25 | 90.17 |
| CDY34345 | Canola | cytosol | 83.06 | 89.41 |
| CDX92679 | Canola | cytosol | 89.62 | 88.17 |
| CDY24856 | Canola | cytosol | 85.79 | 87.22 |
| CDY08967 | Canola | cytosol, golgi, plasma membrane | 84.15 | 86.03 |
| VIT_16s0013g00880.t01 | Wine grape | plasma membrane | 50.27 | 63.89 |
| GSMUA_Achr1P00500_001 | Banana | extracellular, golgi, plasma membrane | 40.98 | 58.14 |
| PGSC0003DMT400055585 | Potato | cytosol, endoplasmic reticulum, nucleus, plastid | 46.45 | 57.43 |
| Solyc06g034040.1.1 | Tomato | cytosol, golgi, plasma membrane, plastid | 45.9 | 57.14 |
| CDY05844 | Canola | cytosol | 44.81 | 55.03 |
| CDX71696 | Canola | cytosol | 44.26 | 54.36 |
| KRG92187 | Soybean | nucleus | 42.62 | 53.06 |
| Zm00001d027258_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 29.51 | 52.43 |
| KRH34604 | Soybean | endoplasmic reticulum | 42.08 | 52.38 |
| Zm00001d002768_P001 | Maize | golgi, peroxisome, plasma membrane | 42.08 | 49.36 |
| Os04t0546500-01 | Rice | plastid | 39.89 | 49.32 |
| CDY35326 | Canola | plasma membrane | 39.34 | 49.32 |
| CDX77021 | Canola | plasma membrane | 38.8 | 48.97 |
| EES12607 | Sorghum | golgi, peroxisome, plasma membrane | 42.08 | 48.12 |
| TraesCS2A01G417500.1 | Wheat | golgi | 42.08 | 47.83 |
| TraesCS2D01G414800.1 | Wheat | golgi | 41.53 | 47.5 |
| TraesCS2B01G436400.1 | Wheat | golgi, peroxisome, plasma membrane | 40.44 | 46.25 |
| KXG40436 | Sorghum | cytosol, golgi, plasma membrane | 39.89 | 43.71 |
| HORVU5Hr1G056030.1 | Barley | golgi, peroxisome, plasma membrane | 38.25 | 41.92 |
| TraesCS5D01G188400.1 | Wheat | golgi, peroxisome, plasma membrane | 37.7 | 41.32 |
| TraesCS5B01G181700.1 | Wheat | golgi | 37.7 | 41.32 |
| Os09t0324000-02 | Rice | plastid | 33.33 | 38.61 |
| CDX77269 | Canola | endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid | 23.5 | 30.71 |
| CDX99345 | Canola | golgi, plasma membrane, plastid, vacuole | 26.78 | 29.7 |
| CDX92248 | Canola | golgi, plasma membrane, plastid, vacuole | 26.78 | 29.7 |
| CDX75969 | Canola | cytosol, golgi, plasma membrane, plastid | 24.59 | 27.27 |
| CDX82338 | Canola | golgi, plasma membrane, vacuole | 24.59 | 27.27 |
| CDX95515 | Canola | plasma membrane | 22.4 | 25.0 |
| CDY06745 | Canola | plasma membrane | 22.4 | 25.0 |
| CDY20040 | Canola | cytosol | 25.14 | 24.47 |
| CDY03988 | Canola | cytosol, endoplasmic reticulum, golgi | 24.59 | 23.56 |
| CDY49771 | Canola | cytosol | 24.04 | 23.4 |
| CDY18527 | Canola | golgi, plasma membrane, plastid | 20.77 | 23.17 |
| CDY11685 | Canola | cytosol | 22.95 | 21.0 |
| CDX67456 | Canola | cytosol | 22.95 | 21.0 |
| CDY50118 | Canola | cytosol | 24.04 | 19.21 |
Protein Annotations
| MapMan:5.9.2 | unigene:Bna.2121 | GO:C3S7G3 | UniProt:C3S7G3 | EnsemblPlants:CDY11058 | ProteinID:CDY11058 |
| ProteinID:CDY11058.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005811 |
| GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00049017001 | InterPro:Oleosin | PFAM:PF01277 |
| ScanProsite:PS00811 | PANTHER:PTHR33203 | PANTHER:PTHR33203:SF7 | TMHMM:TMhelix | UniParc:UPI00019DBB9C | SEG:seg |
Description
BnaA03g47170DOleosin [Source:UniProtKB/TrEMBL;Acc:C3S7G3]
Coordinates
chrLK032008:+:854509..855846
Molecular Weight (calculated)
20002.9 Da
IEP (calculated)
9.636
GRAVY (calculated)
-0.234
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDTARTHHD ITTRDQYPMM GRDRDQYAII GRDQYQGYGQ DYSKSRQIAK AATAVTAGGS LLVLSSLTLV GTVIALIVAT PLLVIFSPIL VPALITVALL
101: ITGFLSSGGF GIAAITVFSW IYKYATGEHP KGSDKLDSAR MKLGSKAQDM KDRAHYYGQQ HTGGEHVNTD YRNTDRDRTR GTT
101: ITGFLSSGGF GIAAITVFSW IYKYATGEHP KGSDKLDSAR MKLGSKAQDM KDRAHYYGQQ HTGGEHVNTD YRNTDRDRTR GTT
001: MADTARGTHH DIIGRDQYPM MGRDRDQYQM SGRGSDYSKS RQIAKAATAV TAGGSLLVLS SLTLVGTVIA LTVATPLLVI FSPILVPALI TVALLITGFL
101: SSGGFGIAAI TVFSWIYKYA TGEHPQGSDK LDSARMKLGS KAQDLKDRAQ YYGQQHTGGE HDRDRTRGGQ HTT
101: SSGGFGIAAI TVFSWIYKYA TGEHPQGSDK LDSARMKLGS KAQDLKDRAQ YYGQQHTGGE HDRDRTRGGQ HTT
Arabidopsis Description
OLEO1Oleosin [Source:UniProtKB/TrEMBL;Acc:A0A178V1V3]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.