Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d009648_P001 | |
| Zm00001d044080_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G25140.1 | Zm00001d009648_P001 | AT3G18570.1 | 21798944 |
| AT4G25140.1 | Zm00001d044080_P001 | AT3G18570.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG40436 | Sorghum | cytosol, golgi, plasma membrane | 77.67 | 47.9 |
| GSMUA_Achr1P00500_001 | Banana | extracellular, golgi, plasma membrane | 50.49 | 40.31 |
| VIT_16s0013g00880.t01 | Wine grape | plasma membrane | 53.4 | 38.19 |
| Os09t0324000-02 | Rice | plastid | 55.34 | 36.08 |
| HORVU5Hr1G056030.1 | Barley | golgi, peroxisome, plasma membrane | 58.25 | 35.93 |
| TraesCS5D01G188400.1 | Wheat | golgi, peroxisome, plasma membrane | 57.28 | 35.33 |
| TraesCS5B01G181700.1 | Wheat | golgi | 57.28 | 35.33 |
| Solyc06g034040.1.1 | Tomato | cytosol, golgi, plasma membrane, plastid | 49.51 | 34.69 |
| KRH34604 | Soybean | endoplasmic reticulum | 48.54 | 34.01 |
| KRG92187 | Soybean | nucleus | 48.54 | 34.01 |
| Zm00001d002768_P001 | Maize | golgi, peroxisome, plasma membrane | 51.46 | 33.97 |
| PGSC0003DMT400055585 | Potato | cytosol, endoplasmic reticulum, nucleus, plastid | 48.54 | 33.78 |
| AT5G51210.1 | Thale cress | cytosol, golgi, plasma membrane | 45.63 | 33.33 |
| CDY34345 | Canola | cytosol | 51.46 | 31.18 |
| AT4G25140.1 | Thale cress | cytosol, golgi, plasma membrane | 51.46 | 30.64 |
| CDY03377 | Canola | cytosol | 50.49 | 30.59 |
| CDY05844 | Canola | cytosol | 42.72 | 29.53 |
| Bra035733.1-P | Field mustard | plasma membrane | 42.72 | 29.53 |
| CDY11058 | Canola | cytosol | 52.43 | 29.51 |
| CDY24856 | Canola | cytosol | 51.46 | 29.44 |
| Bra010474.1-P | Field mustard | cytosol, golgi, plasma membrane | 51.46 | 29.44 |
| Bra019186.1-P | Field mustard | cytosol, golgi, plasma membrane | 52.43 | 29.35 |
| CDX92679 | Canola | cytosol | 52.43 | 29.03 |
| CDX71696 | Canola | cytosol | 41.75 | 28.86 |
| CDY08967 | Canola | cytosol, golgi, plasma membrane | 48.54 | 27.93 |
| Bra013866.1-P | Field mustard | cytosol, golgi, nucleus | 51.46 | 27.18 |
| Zm00001d009648_P001 | Maize | plasma membrane | 27.18 | 17.83 |
| Zm00001d013494_P001 | Maize | cytosol | 28.16 | 15.59 |
| Zm00001d033612_P001 | Maize | cytosol, golgi, plasma membrane | 24.27 | 14.2 |
| Zm00001d044080_P001 | Maize | plastid | 24.27 | 13.37 |
Protein Annotations
| EnsemblPlants:Zm00001d027258_P001 | EnsemblPlants:Zm00001d027258_T001 | EnsemblPlantsGene:Zm00001d027258 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005811 | GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Oleosin |
| PANTHER:PTHR33203 | PANTHER:PTHR33203:SF1 | PFAM:PF01277 | ProteinID:ONL92452.1 | ScanProsite:PS00811 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI00084448C9 | UniProt:A0A1D6JJC9 | MapMan:5.9.2 | : | : |
Description
Oleosin
Coordinates
chr1:+:689056..689704
Molecular Weight (calculated)
10534.3 Da
IEP (calculated)
10.571
GRAVY (calculated)
1.188
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVAKALATA TAAFSMLLLS GLAVTGTVLA LIVATPLMVI FSPVLVPAAI TVALLTVGIV SSGGFGVAAV AVLAWVYRYL QTTTSSSGRL QVPNCLHNKT
101: LRY
101: LRY
001: MADQTRTHHE MISRDSTQEA HPKARQMVKA ATAVTAGGSL LVLSGLTLAG TVIALTVATP LLVIFSPVLV PAVVTVALII TGFLASGGFG IAAITAFSWL
101: YRHMTGSGSD KIENARMKVG SRVQDTKYGQ HNIGVQHQQV S
101: YRHMTGSGSD KIENARMKVG SRVQDTKYGQ HNIGVQHQQV S
Arabidopsis Description
OL3Oleosin [Source:UniProtKB/TrEMBL;Acc:Q5HZ52]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.