Factsheet for Bra013866.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, nucleus, cytosol

Predictor Summary:

nucleus 3
extracellular 2
golgi 2
mitochondrion 1
plasma membrane 2
plastid 1
endoplasmic reticulum 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	extracellular
MultiLoc:	golgi
Plant-mPloc:	mitochondrion, nucleus, plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001711.1-P
Bra022333.1-P
Bra037577.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G25140.1	Bra001711.1-P	AT3G18570.1	21798944
AT4G25140.1	Bra022333.1-P	AT3G18570.1	21798944
AT4G25140.1	Bra037577.1-P	AT3G18570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34345	Canola	cytosol	84.1	96.47
AT4G25140.1	Thale cress	cytosol, golgi, plasma membrane	81.03	91.33
Bra010474.1-P	Field mustard	cytosol, golgi, plasma membrane	81.03	87.78
Bra019186.1-P	Field mustard	cytosol, golgi, plasma membrane	80.51	85.33
VIT_16s0013g00880.t01	Wine grape	plasma membrane	46.15	62.5
GSMUA_Achr1P00500_001	Banana	extracellular, golgi, plasma membrane	38.46	58.14
PGSC0003DMT400055585	Potato	cytosol, endoplasmic reticulum, nucleus, plastid	43.59	57.43
Solyc06g034040.1.1	Tomato	cytosol, golgi, plasma membrane, plastid	43.08	57.14
Bra035733.1-P	Field mustard	plasma membrane	42.56	55.7
KRG92187	Soybean	nucleus	40.0	53.06
KRH34604	Soybean	endoplasmic reticulum	39.49	52.38
Zm00001d027258_P001	Maize	endoplasmic reticulum, extracellular, vacuole	27.18	51.46
Os04t0546500-01	Rice	plastid	37.95	50.0
Bra034280.1-P	Field mustard	plasma membrane	36.92	49.32
Zm00001d002768_P001	Maize	golgi, peroxisome, plasma membrane	38.46	48.08
EES12607	Sorghum	golgi, peroxisome, plasma membrane	38.46	46.88
TraesCS2D01G414800.1	Wheat	golgi	38.46	46.88
TraesCS2A01G417500.1	Wheat	golgi	38.46	46.58
TraesCS2B01G436400.1	Wheat	golgi, peroxisome, plasma membrane	37.44	45.62
KXG40436	Sorghum	cytosol, golgi, plasma membrane	36.92	43.11
HORVU5Hr1G056030.1	Barley	golgi, peroxisome, plasma membrane	35.38	41.32
TraesCS5D01G188400.1	Wheat	golgi, peroxisome, plasma membrane	34.87	40.72
TraesCS5B01G181700.1	Wheat	golgi	34.87	40.72
Os09t0324000-02	Rice	plastid	30.26	37.34
Bra022333.1-P	Field mustard	golgi, plasma membrane, plastid, vacuole	24.1	28.48
Bra014166.1-P	Field mustard	plastid	23.59	27.71
Bra018770.1-P	Field mustard	plastid	22.05	26.71
Bra039071.1-P	Field mustard	golgi, peroxisome, plasma membrane	24.1	25.0
Bra001711.1-P	Field mustard	golgi, plasma membrane, vacuole	21.54	23.86
Bra033021.1-P	Field mustard	golgi, peroxisome, plasma membrane	22.56	23.4
Bra037577.1-P	Field mustard	golgi, plasma membrane, plastid	17.95	21.34
Bra028458.1-P	Field mustard	golgi, nucleus, peroxisome	22.05	20.38
Bra025577.1-P	Field mustard	cytosol, golgi, nucleus	22.56	20.0

Protein Annotations

EnsemblPlants:Bra013866.1	EnsemblPlants:Bra013866.1-P	EnsemblPlantsGene:Bra013866	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005811	GO:GO:0012511	GO:GO:0016020	GO:GO:0016021	InterPro:Oleosin
PANTHER:PTHR33203	PANTHER:PTHR33203:SF7	PFAM:PF01277	ScanProsite:PS00811	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002546836	UniProt:M4DBK6	MapMan:5.9.2	:	:	:

Description

AT4G25140 (E=9e-055) OLEO1, OLE1 | OLEO1 (OLEOSIN 1)

Coordinates

chrA01:+:8131449..8132324

Molecular Weight (calculated)

21512.6 Da

IEP (calculated)

9.749

GRAVY (calculated)

-0.419

Length

195 amino acids

Sequence
(BLAST)

001: MTDTARTHHD ITSRDQYPRD RDQYSMIGRD RDKYSMIGRD RDQYNMYGRD YSKSRQIAKA VTAVTAGGSL LVLSSLTLVG TVIALTVATP LLVIFSPILV
101: PALITVALLI TGFLSSGGFG IAAITVFSWI YKYATGEHPQ GSDKLDSARM KLGGKVQDMK DRAQYYGQQH TGGYGQQQTG GEHDRDRTRG TQHTT

Best Arabidopsis Sequence Match ( AT4G25140.1 )
(BLAST)

001: MADTARGTHH DIIGRDQYPM MGRDRDQYQM SGRGSDYSKS RQIAKAATAV TAGGSLLVLS SLTLVGTVIA LTVATPLLVI FSPILVPALI TVALLITGFL
101: SSGGFGIAAI TVFSWIYKYA TGEHPQGSDK LDSARMKLGS KAQDLKDRAQ YYGQQHTGGE HDRDRTRGGQ HTT

Arabidopsis Description

OLEO1Oleosin [Source:UniProtKB/TrEMBL;Acc:A0A178V1V3]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.