Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- golgi 3
- peroxisome 1
- mitochondrion 1
- plastid 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra001711.1-P | |
| Bra022333.1-P | |
| Bra037577.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G25140.1 | Bra001711.1-P | AT3G18570.1 | 21798944 |
| AT4G25140.1 | Bra022333.1-P | AT3G18570.1 | 21798944 |
| AT4G25140.1 | Bra037577.1-P | AT3G18570.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24856 | Canola | cytosol | 100.0 | 100.0 |
| AT4G25140.1 | Thale cress | cytosol, golgi, plasma membrane | 88.33 | 91.91 |
| Bra019186.1-P | Field mustard | cytosol, golgi, plasma membrane | 86.11 | 84.24 |
| Bra013866.1-P | Field mustard | cytosol, golgi, nucleus | 87.78 | 81.03 |
| VIT_16s0013g00880.t01 | Wine grape | plasma membrane | 50.56 | 63.19 |
| GSMUA_Achr1P00500_001 | Banana | extracellular, golgi, plasma membrane | 42.22 | 58.91 |
| PGSC0003DMT400055585 | Potato | cytosol, endoplasmic reticulum, nucleus, plastid | 48.33 | 58.78 |
| Solyc06g034040.1.1 | Tomato | cytosol, golgi, plasma membrane, plastid | 47.78 | 58.5 |
| Bra035733.1-P | Field mustard | plasma membrane | 47.22 | 57.05 |
| KRH34604 | Soybean | endoplasmic reticulum | 45.56 | 55.78 |
| KRG92187 | Soybean | nucleus | 45.0 | 55.1 |
| Zm00001d027258_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 29.44 | 51.46 |
| Os04t0546500-01 | Rice | plastid | 42.22 | 51.35 |
| Bra034280.1-P | Field mustard | plasma membrane | 41.11 | 50.68 |
| Zm00001d002768_P001 | Maize | golgi, peroxisome, plasma membrane | 43.89 | 50.64 |
| TraesCS2A01G417500.1 | Wheat | golgi | 44.44 | 49.69 |
| EES12607 | Sorghum | golgi, peroxisome, plasma membrane | 43.89 | 49.38 |
| TraesCS2D01G414800.1 | Wheat | golgi | 43.89 | 49.38 |
| TraesCS2B01G436400.1 | Wheat | golgi, peroxisome, plasma membrane | 42.78 | 48.12 |
| KXG40436 | Sorghum | cytosol, golgi, plasma membrane | 41.11 | 44.31 |
| HORVU5Hr1G056030.1 | Barley | golgi, peroxisome, plasma membrane | 38.89 | 41.92 |
| TraesCS5B01G181700.1 | Wheat | golgi | 38.89 | 41.92 |
| TraesCS5D01G188400.1 | Wheat | golgi, peroxisome, plasma membrane | 38.33 | 41.32 |
| Os09t0324000-02 | Rice | plastid | 34.44 | 39.24 |
| Bra022333.1-P | Field mustard | golgi, plasma membrane, plastid, vacuole | 27.22 | 29.7 |
| Bra014166.1-P | Field mustard | plastid | 27.22 | 29.52 |
| Bra018770.1-P | Field mustard | plastid | 25.56 | 28.57 |
| Bra001711.1-P | Field mustard | golgi, plasma membrane, vacuole | 24.44 | 25.0 |
| Bra039071.1-P | Field mustard | golgi, peroxisome, plasma membrane | 26.11 | 25.0 |
| Bra033021.1-P | Field mustard | golgi, peroxisome, plasma membrane | 25.56 | 24.47 |
| Bra037577.1-P | Field mustard | golgi, plasma membrane, plastid | 21.11 | 23.17 |
| Bra025577.1-P | Field mustard | cytosol, golgi, nucleus | 24.44 | 20.0 |
| Bra028458.1-P | Field mustard | golgi, nucleus, peroxisome | 23.33 | 19.91 |
Protein Annotations
| EnsemblPlants:Bra010474.1 | EnsemblPlants:Bra010474.1-P | EnsemblPlantsGene:Bra010474 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005811 | GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Oleosin |
| PANTHER:PTHR33203 | PANTHER:PTHR33203:SF7 | PFAM:PF01277 | ScanProsite:PS00811 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0002545A48 | UniProt:M4D1X4 | MapMan:5.9.2 | : | : | : |
Description
AT4G25140 (E=4e-064) OLEO1, OLE1 | OLEO1 (OLEOSIN 1)
Coordinates
chrA08:-:14719928..14720804
Molecular Weight (calculated)
19516.1 Da
IEP (calculated)
9.492
GRAVY (calculated)
-0.248
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MADTARTHHD ITSRDQYPIL GRDRDQYPYG RSDYQTSGQD YSKTRQIAKA ATAVTAGGSL LVLSSLTLVG TVIALTVATP LLVIFSPILV PALITVALLI
101: TGFLSSGGFG IAAITVFSWI YKYATGEHPQ GSDKLDSARM KLGTKAQDIK DRAQYYGQQH TGGEHDRDRT RGTHHTTTTT
101: TGFLSSGGFG IAAITVFSWI YKYATGEHPQ GSDKLDSARM KLGTKAQDIK DRAQYYGQQH TGGEHDRDRT RGTHHTTTTT
001: MADTARGTHH DIIGRDQYPM MGRDRDQYQM SGRGSDYSKS RQIAKAATAV TAGGSLLVLS SLTLVGTVIA LTVATPLLVI FSPILVPALI TVALLITGFL
101: SSGGFGIAAI TVFSWIYKYA TGEHPQGSDK LDSARMKLGS KAQDLKDRAQ YYGQQHTGGE HDRDRTRGGQ HTT
101: SSGGFGIAAI TVFSWIYKYA TGEHPQGSDK LDSARMKLGS KAQDLKDRAQ YYGQQHTGGE HDRDRTRGGQ HTT
Arabidopsis Description
OLEO1Oleosin [Source:UniProtKB/TrEMBL;Acc:A0A178V1V3]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.