Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- golgi 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| endoplasmic reticulum:
27224218
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G25140.1 | KRH03819 | AT3G18570.1 | 21798944 |
| AT4G25140.1 | KRH16003 | AT3G18570.1 | 21798944 |
| AT4G25140.1 | KRH54801 | AT3G18570.1 | 21798944 |
| AT4G25140.1 | KRH56699 | AT3G18570.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92187 | Soybean | nucleus | 89.12 | 89.12 |
| Solyc06g034040.1.1 | Tomato | cytosol, golgi, plasma membrane, plastid | 63.95 | 63.95 |
| PGSC0003DMT400055585 | Potato | cytosol, endoplasmic reticulum, nucleus, plastid | 63.95 | 63.51 |
| VIT_16s0013g00880.t01 | Wine grape | plasma membrane | 61.22 | 62.5 |
| GSMUA_Achr1P00500_001 | Banana | extracellular, golgi, plasma membrane | 51.7 | 58.91 |
| AT5G51210.1 | Thale cress | cytosol, golgi, plasma membrane | 52.38 | 54.61 |
| Zm00001d027258_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 34.01 | 48.54 |
| CDY05844 | Canola | cytosol | 48.98 | 48.32 |
| CDX71696 | Canola | cytosol | 48.98 | 48.32 |
| Bra035733.1-P | Field mustard | plasma membrane | 48.98 | 48.32 |
| TraesCS2D01G414800.1 | Wheat | golgi | 52.38 | 48.12 |
| Os04t0546500-01 | Rice | plastid | 48.3 | 47.97 |
| TraesCS2A01G417500.1 | Wheat | golgi | 52.38 | 47.83 |
| TraesCS2B01G436400.1 | Wheat | golgi, peroxisome, plasma membrane | 51.7 | 47.5 |
| Zm00001d002768_P001 | Maize | golgi, peroxisome, plasma membrane | 49.66 | 46.79 |
| AT4G25140.1 | Thale cress | cytosol, golgi, plasma membrane | 54.42 | 46.24 |
| EES12607 | Sorghum | golgi, peroxisome, plasma membrane | 49.66 | 45.62 |
| Bra010474.1-P | Field mustard | cytosol, golgi, plasma membrane | 55.78 | 45.56 |
| CDY24856 | Canola | cytosol | 55.78 | 45.56 |
| CDY03377 | Canola | cytosol | 52.38 | 45.29 |
| CDY08967 | Canola | cytosol, golgi, plasma membrane | 55.1 | 45.25 |
| CDY34345 | Canola | cytosol | 51.7 | 44.71 |
| CDY11058 | Canola | cytosol | 52.38 | 42.08 |
| Bra019186.1-P | Field mustard | cytosol, golgi, plasma membrane | 51.7 | 41.3 |
| CDX92679 | Canola | cytosol | 51.7 | 40.86 |
| Bra013866.1-P | Field mustard | cytosol, golgi, nucleus | 52.38 | 39.49 |
| KRH61966 | Soybean | endoplasmic reticulum, nucleus | 43.54 | 38.1 |
| TraesCS5D01G188400.1 | Wheat | golgi, peroxisome, plasma membrane | 42.86 | 37.72 |
| TraesCS5B01G181700.1 | Wheat | golgi | 42.86 | 37.72 |
| HORVU5Hr1G056030.1 | Barley | golgi, peroxisome, plasma membrane | 42.18 | 37.13 |
| KXG40436 | Sorghum | cytosol, golgi, plasma membrane | 42.18 | 37.13 |
| Os09t0324000-02 | Rice | plastid | 36.73 | 34.18 |
| KRH03243 | Soybean | golgi, plasma membrane, plastid, vacuole | 35.37 | 32.5 |
| KRH52626 | Soybean | endoplasmic reticulum | 43.54 | 30.19 |
| KRH03819 | Soybean | endoplasmic reticulum, nucleus | 30.61 | 28.85 |
| KRH16003 | Soybean | golgi, plasma membrane, vacuole | 27.89 | 28.08 |
| KRH56699 | Soybean | endoplasmic reticulum | 29.93 | 26.99 |
| KRG94116 | Soybean | nucleus | 31.29 | 20.35 |
| KRH07172 | Soybean | endoplasmic reticulum, nucleus | 30.61 | 20.18 |
| KRH54801 | Soybean | plasma membrane | 25.17 | 19.37 |
| KRG93234 | Soybean | nucleus | 23.13 | 17.99 |
| KRH56554 | Soybean | endoplasmic reticulum, nucleus | 23.81 | 17.68 |
Protein Annotations
| EntrezGene:100306353 | MapMan:5.9.2 | EMBL:ACUP02006610 | EMBL:BT090411 | UniProt:C6SZ13 | EnsemblPlantsGene:GLYMA_10G193900 |
| GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019915 | GO:GO:0019953 |
| EnsemblPlants:KRH34604 | ProteinID:KRH34604 | ProteinID:KRH34604.1 | InterPro:Oleosin | PFAM:PF01277 | PANTHER:PTHR33203 |
| PANTHER:PTHR33203:SF7 | TMHMM:TMhelix | UniParc:UPI0001B14E3F | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:-:42600687..42601680
Molecular Weight (calculated)
15778.2 Da
IEP (calculated)
9.698
GRAVY (calculated)
0.325
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MAELHYQPQH QYPLRYPNDP HQQTRSSTHQ VVKAATAVTA GGSLLILASL ILAATVIALT IVTPLFVIFS PVLVPAVITV ALLSLGFLAS SGFGVAAITV
101: LAWIYRYVTG KQPPGADQLD SARHKIMDKA REIKDYGQQQ ISGVQAS
101: LAWIYRYVTG KQPPGADQLD SARHKIMDKA REIKDYGQQQ ISGVQAS
001: MADTARGTHH DIIGRDQYPM MGRDRDQYQM SGRGSDYSKS RQIAKAATAV TAGGSLLVLS SLTLVGTVIA LTVATPLLVI FSPILVPALI TVALLITGFL
101: SSGGFGIAAI TVFSWIYKYA TGEHPQGSDK LDSARMKLGS KAQDLKDRAQ YYGQQHTGGE HDRDRTRGGQ HTT
101: SSGGFGIAAI TVFSWIYKYA TGEHPQGSDK LDSARMKLGS KAQDLKDRAQ YYGQQHTGGE HDRDRTRGGQ HTT
Arabidopsis Description
OLEO1Oleosin [Source:UniProtKB/TrEMBL;Acc:A0A178V1V3]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.