Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1A01G415100.1 | |
| TraesCS1B01G445100.1 | |
| TraesCS1D01G422600.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G25140.1 | TraesCS1A01G415100.1 | AT3G18570.1 | 21798944 |
| AT4G25140.1 | TraesCS1B01G445100.1 | AT3G18570.1 | 21798944 |
| AT4G25140.1 | TraesCS1D01G422600.1 | AT3G18570.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G414800.1 | Wheat | golgi | 97.5 | 97.5 |
| TraesCS2A01G417500.1 | Wheat | golgi | 97.5 | 96.89 |
| Zm00001d002768_P001 | Maize | golgi, peroxisome, plasma membrane | 84.38 | 86.54 |
| Os04t0546500-01 | Rice | plastid | 79.38 | 85.81 |
| EES12607 | Sorghum | golgi, peroxisome, plasma membrane | 83.75 | 83.75 |
| GSMUA_Achr1P00500_001 | Banana | extracellular, golgi, plasma membrane | 58.12 | 72.09 |
| Solyc06g034040.1.1 | Tomato | cytosol, golgi, plasma membrane, plastid | 51.88 | 56.46 |
| VIT_16s0013g00880.t01 | Wine grape | plasma membrane | 50.62 | 56.25 |
| PGSC0003DMT400055585 | Potato | cytosol, endoplasmic reticulum, nucleus, plastid | 51.88 | 56.08 |
| KRG92187 | Soybean | nucleus | 49.38 | 53.74 |
| TraesCS5B01G181700.1 | Wheat | golgi | 54.38 | 52.1 |
| KRH34604 | Soybean | endoplasmic reticulum | 47.5 | 51.7 |
| AT5G51210.1 | Thale cress | cytosol, golgi, plasma membrane | 42.5 | 48.23 |
| AT4G25140.1 | Thale cress | cytosol, golgi, plasma membrane | 47.5 | 43.93 |
| CDY03377 | Canola | cytosol | 45.62 | 42.94 |
| CDY24856 | Canola | cytosol | 48.12 | 42.78 |
| Bra010474.1-P | Field mustard | cytosol, golgi, plasma membrane | 48.12 | 42.78 |
| CDY34345 | Canola | cytosol | 45.0 | 42.35 |
| CDY05844 | Canola | cytosol | 39.38 | 42.28 |
| Bra035733.1-P | Field mustard | plasma membrane | 39.38 | 42.28 |
| CDY08967 | Canola | cytosol, golgi, plasma membrane | 46.88 | 41.9 |
| CDX71696 | Canola | cytosol | 38.75 | 41.61 |
| CDY11058 | Canola | cytosol | 46.25 | 40.44 |
| Bra019186.1-P | Field mustard | cytosol, golgi, plasma membrane | 46.25 | 40.22 |
| CDX92679 | Canola | cytosol | 45.62 | 39.25 |
| Bra013866.1-P | Field mustard | cytosol, golgi, nucleus | 45.62 | 37.44 |
| TraesCS1B01G445100.1 | Wheat | plasma membrane | 31.25 | 29.94 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G436400.1 | EnsemblPlantsGene:TraesCS2B01G436400 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Oleosin | PANTHER:PTHR33203 | PANTHER:PTHR33203:SF1 |
| PFAM:PF01277 | ScanProsite:PS00811 | SEG:seg | TMHMM:TMhelix | MapMan:5.9.2 | : |
Description
No Description!
Coordinates
chr2B:+:627151357..627151839
Molecular Weight (calculated)
16305.8 Da
IEP (calculated)
9.611
GRAVY (calculated)
0.214
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MADHHRDRGV LGGGGAFGDR SGHGGYGGDH HEQHQQKQPA LMCALKAATA ATAAGSMLLL SGLILAGTVI ALTVATPVLV IFSPVLVPAA IALALMSAGF
101: VTSGGLGVAA LSVFSWMYKY LTGKHPPGAD QLDHAKARLA SKARDIKDAA QTRIDQAQGA
101: VTSGGLGVAA LSVFSWMYKY LTGKHPPGAD QLDHAKARLA SKARDIKDAA QTRIDQAQGA
001: MADTARGTHH DIIGRDQYPM MGRDRDQYQM SGRGSDYSKS RQIAKAATAV TAGGSLLVLS SLTLVGTVIA LTVATPLLVI FSPILVPALI TVALLITGFL
101: SSGGFGIAAI TVFSWIYKYA TGEHPQGSDK LDSARMKLGS KAQDLKDRAQ YYGQQHTGGE HDRDRTRGGQ HTT
101: SSGGFGIAAI TVFSWIYKYA TGEHPQGSDK LDSARMKLGS KAQDLKDRAQ YYGQQHTGGE HDRDRTRGGQ HTT
Arabidopsis Description
OLEO1Oleosin [Source:UniProtKB/TrEMBL;Acc:A0A178V1V3]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.