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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:
  • plastid 2
  • golgi 2
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, plastid
Any Predictor:plastid, secretory
BaCelLo:plastid
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY18527 Canola golgi, plasma membrane, plastid 98.78 98.78
Bra022333.1-P Field mustard golgi, plasma membrane, plastid, vacuole 75.0 74.55
AT3G18570.1 Thale cress golgi, peroxisome, plasma membrane, plastid 74.39 73.49
Bra001711.1-P Field mustard golgi, plasma membrane, vacuole 69.51 64.77
Bra018770.1-P Field mustard plastid 56.71 57.76
Bra014166.1-P Field mustard plastid 54.88 54.22
PGSC0003DMT400014323 Potato plastid 51.83 50.6
Solyc03g119820.1.1 Tomato plastid 50.0 49.7
KRH03819 Soybean endoplasmic reticulum, nucleus 45.73 48.08
KRH16003 Soybean golgi, plasma membrane, vacuole 42.68 47.95
VIT_17s0000g04210.t01 Wine grape plastid 46.34 47.2
KRH56699 Soybean endoplasmic reticulum 45.73 46.01
GSMUA_Achr1P11880_001 Banana plastid 43.9 42.86
GSMUA_Achr3P26330_001 Banana plastid 43.29 42.77
Zm00001d009648_P001 Maize plasma membrane 40.24 42.04
Os05t0576700-01 Rice plastid 43.9 41.62
PGSC0003DMT400010423 Potato golgi, mitochondrion, plasma membrane, plastid 37.8 41.61
EES19991 Sorghum golgi, mitochondrion, peroxisome, plastid 42.07 41.32
HORVU1Hr1G091010.1 Barley cytosol, golgi, plasma membrane 41.46 40.48
Solyc06g069260.1.1 Tomato plasma membrane, plastid 37.2 39.87
TraesCS1A01G415100.1 Wheat plasma membrane 40.24 39.52
TraesCS1B01G445100.1 Wheat plasma membrane 40.24 39.52
TraesCS1D01G422600.1 Wheat plasma membrane 40.24 39.52
Os01t0643900-01 Rice golgi, nucleus, plasma membrane 34.15 33.33
OQU87227 Sorghum plastid 36.59 31.09
KRH54801 Soybean plasma membrane 35.37 30.37
Zm00001d044080_P001 Maize plastid 33.54 29.41
Bra034280.1-P Field mustard plasma membrane 25.0 28.08
HORVU3Hr1G057690.1 Barley plasma membrane 25.61 27.1
Bra010474.1-P Field mustard cytosol, golgi, plasma membrane 23.17 21.11
Bra035733.1-P Field mustard plasma membrane 18.29 20.13
Bra019186.1-P Field mustard cytosol, golgi, plasma membrane 22.56 20.11
Bra033021.1-P Field mustard golgi, peroxisome, plasma membrane 21.34 18.62
Bra039071.1-P Field mustard golgi, peroxisome, plasma membrane 20.73 18.09
Bra013866.1-P Field mustard cytosol, golgi, nucleus 21.34 17.95
Bra028458.1-P Field mustard golgi, nucleus, peroxisome 20.73 16.11
Bra025577.1-P Field mustard cytosol, golgi, nucleus 21.34 15.91
Protein Annotations
EnsemblPlants:Bra037577.1EnsemblPlants:Bra037577.1-PEnsemblPlantsGene:Bra037577GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0012511GO:GO:0016020GO:GO:0016021InterPro:OleosinPANTHER:PTHR33203
PANTHER:PTHR33203:SF4PFAM:PF01277SEG:segTMHMM:TMhelixUniParc:UPI0002545042UniProt:M4F914
MapMan:5.9.2:::::
Description
AT3G18570 (E=1e-057) | glycine-rich protein / oleosin
Coordinates
chrA01:+:22049924..22050418
Molecular Weight (calculated)
18069.0 Da
IEP (calculated)
9.719
GRAVY (calculated)
0.266
Length
164 amino acids
Sequence
(BLAST)
001: MAETLSTGES RYWPIYGSNT AERNSPYPSL LRLLRSHSPT ASHLFGFLAL LISGCLLTFL LGVSLTATAL GFIAFLPLII ISGPIWLPGF VLVGRCLTVV
101: RFLVGTVAIV SWTYRYFREM HPAGSDQMDY ARGRIYDTAS HVKDYARKYG GYFHGRAKDA APGA
Best Arabidopsis Sequence Match ( AT3G18570.1 )
(BLAST)
001: MAERFSSGEA QYWPNYGSTA TTTVSNSPIS SFFHQLRSHS PTSSQLFGFL ALFISTGILL FLLGVSVTAA VLGFIVFLPL IIISSPIWIP VFVVVGGFLT
101: VSGFLVGTVA LVSWTYRYFR GMHPVGSNQM DYARSRIYDT ASHVKDYARE YGGYFHGRAK DAAPGA
Arabidopsis Description
Oleosin family protein [Source:UniProtKB/TrEMBL;Acc:Q9LII2]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.