Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G422600.1 | Wheat | plasma membrane | 93.45 | 94.01 |
| TraesCS1B01G445100.1 | Wheat | plasma membrane | 93.45 | 94.01 |
| TraesCS1A01G415100.1 | Wheat | plasma membrane | 92.26 | 92.81 |
| GSMUA_Achr3P26330_001 | Banana | plastid | 57.74 | 58.43 |
| GSMUA_Achr1P11880_001 | Banana | plastid | 54.76 | 54.76 |
| KRH03819 | Soybean | endoplasmic reticulum, nucleus | 50.0 | 53.85 |
| PGSC0003DMT400014323 | Potato | plastid | 53.57 | 53.57 |
| Solyc03g119820.1.1 | Tomato | plastid | 52.38 | 53.33 |
| VIT_17s0000g04210.t01 | Wine grape | plastid | 50.6 | 52.8 |
| KRH56699 | Soybean | endoplasmic reticulum | 51.19 | 52.76 |
| PGSC0003DMT400010423 | Potato | golgi, mitochondrion, plasma membrane, plastid | 41.67 | 46.98 |
| CDX92248 | Canola | golgi, plasma membrane, plastid, vacuole | 44.64 | 45.45 |
| Bra022333.1-P | Field mustard | golgi, plasma membrane, plastid, vacuole | 44.64 | 45.45 |
| KRH16003 | Soybean | golgi, plasma membrane, vacuole | 39.29 | 45.21 |
| Solyc06g069260.1.1 | Tomato | plasma membrane, plastid | 41.07 | 45.1 |
| CDX99345 | Canola | golgi, plasma membrane, plastid, vacuole | 44.05 | 44.85 |
| AT3G18570.1 | Thale cress | golgi, peroxisome, plasma membrane, plastid | 42.86 | 43.37 |
| CDX82338 | Canola | golgi, plasma membrane, vacuole | 42.26 | 43.03 |
| CDX95515 | Canola | plasma membrane | 41.67 | 42.68 |
| CDY06745 | Canola | plasma membrane | 41.67 | 42.68 |
| CDX75969 | Canola | cytosol, golgi, plasma membrane, plastid | 41.07 | 41.82 |
| Bra037577.1-P | Field mustard | golgi, plasma membrane, plastid | 40.48 | 41.46 |
| Bra018770.1-P | Field mustard | plastid | 39.29 | 40.99 |
| CDY18527 | Canola | golgi, plasma membrane, plastid | 39.88 | 40.85 |
| AT1G48990.1 | Thale cress | plastid | 41.07 | 40.83 |
| Bra001711.1-P | Field mustard | golgi, plasma membrane, vacuole | 41.67 | 39.77 |
| Bra014166.1-P | Field mustard | plastid | 39.29 | 39.76 |
| HORVU3Hr1G057690.1 | Barley | plasma membrane | 35.12 | 38.06 |
| KRH54801 | Soybean | plasma membrane | 40.48 | 35.6 |
| CDX77269 | Canola | endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid | 28.57 | 34.29 |
| HORVU5Hr1G056030.1 | Barley | golgi, peroxisome, plasma membrane | 26.79 | 26.95 |
| HORVU4Hr1G005800.1 | Barley | plastid | 24.4 | 17.15 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G091010.1 | EnsemblPlantsGene:HORVU1Hr1G091010 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Oleosin | PANTHER:PTHR33203 | PANTHER:PTHR33203:SF4 |
| PFAM:PF01277 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002959514 | UniProt:M0WY94 | MapMan:5.9.2 |
Description
No Description!
Coordinates
chrchr1H:+:547258318..547259602
Molecular Weight (calculated)
17693.3 Da
IEP (calculated)
10.402
GRAVY (calculated)
0.316
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MADRHGEGGV ASARRPWRTD HLDDQSTTLL QRVQAHLPTT TQVVGVLTLL IAGAALLALA GLTLTGAVVA LVFLGPLALL TSPIWVPFSF ALLVVAAAAL
101: SFVGFAVAAL AAGTWAYRYF TGRHPVGADR VDRARSRLAD TASHVKDYAR REYGGYLGNR TKDAAPGA
101: SFVGFAVAAL AAGTWAYRYF TGRHPVGADR VDRARSRLAD TASHVKDYAR REYGGYLGNR TKDAAPGA
001: MAERFSSGEA QYWPNYGSTA TTTVSNSPIS SFFHQLRSHS PTSSQLFGFL ALFISTGILL FLLGVSVTAA VLGFIVFLPL IIISSPIWIP VFVVVGGFLT
101: VSGFLVGTVA LVSWTYRYFR GMHPVGSNQM DYARSRIYDT ASHVKDYARE YGGYFHGRAK DAAPGA
101: VSGFLVGTVA LVSWTYRYFR GMHPVGSNQM DYARSRIYDT ASHVKDYARE YGGYFHGRAK DAAPGA
Arabidopsis Description
Oleosin family protein [Source:UniProtKB/TrEMBL;Acc:Q9LII2]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.