Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane, golgi, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- golgi 2
- extracellular 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82338 | Canola | golgi, plasma membrane, vacuole | 95.15 | 95.15 |
| CDX92248 | Canola | golgi, plasma membrane, plastid, vacuole | 79.39 | 79.39 |
| CDX99345 | Canola | golgi, plasma membrane, plastid, vacuole | 78.79 | 78.79 |
| AT3G18570.1 | Thale cress | golgi, peroxisome, plasma membrane, plastid | 78.18 | 77.71 |
| CDX95515 | Canola | plasma membrane | 71.52 | 71.95 |
| CDY06745 | Canola | plasma membrane | 71.52 | 71.95 |
| CDY18527 | Canola | golgi, plasma membrane, plastid | 69.09 | 69.51 |
| PGSC0003DMT400014323 | Potato | plastid | 53.94 | 52.98 |
| CDX77269 | Canola | endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid | 44.24 | 52.14 |
| KRH03819 | Soybean | endoplasmic reticulum, nucleus | 49.09 | 51.92 |
| Solyc03g119820.1.1 | Tomato | plastid | 50.91 | 50.91 |
| VIT_17s0000g04210.t01 | Wine grape | plastid | 49.09 | 50.31 |
| KRH56699 | Soybean | endoplasmic reticulum | 49.7 | 50.31 |
| KRH16003 | Soybean | golgi, plasma membrane, vacuole | 43.03 | 48.63 |
| GSMUA_Achr3P26330_001 | Banana | plastid | 44.24 | 43.98 |
| Zm00001d009648_P001 | Maize | plasma membrane | 41.21 | 43.31 |
| EES19991 | Sorghum | golgi, mitochondrion, peroxisome, plastid | 43.03 | 42.52 |
| TraesCS1B01G445100.1 | Wheat | plasma membrane | 42.42 | 41.92 |
| PGSC0003DMT400010423 | Potato | golgi, mitochondrion, plasma membrane, plastid | 37.58 | 41.61 |
| TraesCS1A01G415100.1 | Wheat | plasma membrane | 41.82 | 41.32 |
| TraesCS1D01G422600.1 | Wheat | plasma membrane | 41.82 | 41.32 |
| HORVU1Hr1G091010.1 | Barley | cytosol, golgi, plasma membrane | 41.82 | 41.07 |
| Os05t0576700-01 | Rice | plastid | 43.03 | 41.04 |
| GSMUA_Achr1P11880_001 | Banana | plastid | 41.21 | 40.48 |
| Solyc06g069260.1.1 | Tomato | plasma membrane, plastid | 35.15 | 37.91 |
| Os01t0643900-01 | Rice | golgi, nucleus, plasma membrane | 34.55 | 33.93 |
| KRH54801 | Soybean | plasma membrane | 37.58 | 32.46 |
| OQU87227 | Sorghum | plastid | 35.76 | 30.57 |
| CDX77021 | Canola | plasma membrane | 26.67 | 30.34 |
| CDY35326 | Canola | plasma membrane | 26.67 | 30.14 |
| HORVU3Hr1G057690.1 | Barley | plasma membrane | 27.27 | 29.03 |
| Zm00001d044080_P001 | Maize | plastid | 32.73 | 28.88 |
| CDX71696 | Canola | cytosol | 23.03 | 25.5 |
| CDY03377 | Canola | cytosol | 26.06 | 25.29 |
| CDY24856 | Canola | cytosol | 27.27 | 25.0 |
| CDX92679 | Canola | cytosol | 27.88 | 24.73 |
| CDY11058 | Canola | cytosol | 27.27 | 24.59 |
| CDY05844 | Canola | cytosol | 21.82 | 24.16 |
| CDY34345 | Canola | cytosol | 24.85 | 24.12 |
| CDY08967 | Canola | cytosol, golgi, plasma membrane | 26.06 | 24.02 |
| CDX67456 | Canola | cytosol | 25.45 | 21.0 |
| CDY11685 | Canola | cytosol | 25.45 | 21.0 |
| CDY20040 | Canola | cytosol | 23.64 | 20.74 |
| CDY49771 | Canola | cytosol | 23.03 | 20.21 |
| CDY03988 | Canola | cytosol, endoplasmic reticulum, golgi | 22.42 | 19.37 |
| CDY50118 | Canola | cytosol | 26.06 | 18.78 |
Protein Annotations
| MapMan:5.9.2 | GO:A0A078CIS7 | EnsemblPlants:CDX75969 | ProteinID:CDX75969 | ProteinID:CDX75969.1 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSBRNA2T00124004001 | InterPro:Oleosin | PFAM:PF01277 | PANTHER:PTHR33203 | PANTHER:PTHR33203:SF4 | TMHMM:TMhelix |
| UniParc:UPI0004EF0DF6 | SEG:seg | : | : | : | : |
Description
BnaC03g40520D
Coordinates
chrLK031805:-:2327516..2328013
Molecular Weight (calculated)
17779.4 Da
IEP (calculated)
7.792
GRAVY (calculated)
0.474
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MAETFSSGDA QYLPIYGGGG TTDSNSPYAL LLSLLRSHSP TSSELFSYLG LFVSVGTLLF LLGIAVTATA IGFIVFIPLI IISSPIWLPV FIVVGVFLSV
101: AGFLVGTLAL ASWTYRYYRG MHPVGSNQMD YARSRIYDTA SHVKDYAREY GGYFHGRAKD AAPGA
101: AGFLVGTLAL ASWTYRYYRG MHPVGSNQMD YARSRIYDTA SHVKDYAREY GGYFHGRAKD AAPGA
001: MAERFSSGEA QYWPNYGSTA TTTVSNSPIS SFFHQLRSHS PTSSQLFGFL ALFISTGILL FLLGVSVTAA VLGFIVFLPL IIISSPIWIP VFVVVGGFLT
101: VSGFLVGTVA LVSWTYRYFR GMHPVGSNQM DYARSRIYDT ASHVKDYARE YGGYFHGRAK DAAPGA
101: VSGFLVGTVA LVSWTYRYFR GMHPVGSNQM DYARSRIYDT ASHVKDYARE YGGYFHGRAK DAAPGA
Arabidopsis Description
Oleosin family protein [Source:UniProtKB/TrEMBL;Acc:Q9LII2]
SUBAcon: [golgi,plasma membrane,peroxisome,plastid]
SUBAcon: [golgi,plasma membrane,peroxisome,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.