Factsheet for Zm00001d013494_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

cytosol: 24406791

extracellular: 22192489

gfp PMID: 24406791 doi

I López-Ribera, JL La Paz, C Repiso, N García, M Miquel, ML Hernández, JM Martínez-Rivas, CM Vicient

Department of Molecular Genetics, Centre for Research in Agricultural Genomics , 08193 Barcelona, Spain.

msms PMID: 22192489 doi

K Witzel, M Shahzad, A Matros, HP Mock, KH Mühling

Institute of Plant Nutrition and Soil Science, Christian Albrechts University, Hermann-Rodewald-Strasse 2, 24118 Kiel, Germany. khmuehling@plantnutrition.uni-kiel.de.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033612_P001	Maize	cytosol, golgi, plasma membrane	85.48	90.34
Os03t0699000-01	Rice	plastid	77.42	83.72
KXG37789	Sorghum	plastid	90.32	65.12
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	48.92	61.07
HORVU4Hr1G005800.1	Barley	plastid	76.34	59.41
PGSC0003DMT400046816	Potato	plastid	42.47	53.38
Solyc02g086490.2.1	Tomato	extracellular	41.94	52.35
Solyc03g112440.1.1	Tomato	golgi, plasma membrane, plastid	42.47	51.63
PGSC0003DMT400032872	Potato	cytosol, golgi, plastid	45.16	50.6
VIT_17s0000g09000.t01	Wine grape	golgi, plasma membrane, vacuole	38.17	50.0
Solyc12g010920.1.1	Tomato	cytosol, golgi, plasma membrane	44.62	48.26
GSMUA_Achr4P13900_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	41.4	40.53
AT3G01570.1	Thale cress	plasma membrane	38.17	38.8
AT3G27660.1	Thale cress	cytosol, golgi, plasma membrane	37.63	36.65
KRG93234	Soybean	nucleus	37.1	36.51
AT5G40420.1	Thale cress	cytosol	38.17	35.68
CDY49771	Canola	cytosol	35.48	35.11
Bra033021.1-P	Field mustard	golgi, peroxisome, plasma membrane	35.48	35.11
CDY03988	Canola	cytosol, endoplasmic reticulum, golgi	35.48	34.55
Zm00001d002768_P001	Maize	golgi, peroxisome, plasma membrane	28.49	33.97
Bra039071.1-P	Field mustard	golgi, peroxisome, plasma membrane	33.87	33.51
CDY20040	Canola	cytosol	33.87	33.51
CDY11685	Canola	cytosol	36.02	33.5
CDX67456	Canola	cytosol	35.48	33.0
KRG94116	Soybean	nucleus	38.71	31.86
Bra028458.1-P	Field mustard	golgi, nucleus, peroxisome	36.02	31.75
KRH07172	Soybean	endoplasmic reticulum, nucleus	37.63	31.39
Bra025577.1-P	Field mustard	cytosol, golgi, nucleus	36.56	30.91
KRH56554	Soybean	endoplasmic reticulum, nucleus	32.26	30.3
Zm00001d027258_P001	Maize	endoplasmic reticulum, extracellular, vacuole	15.59	28.16
CDY50118	Canola	cytosol	34.41	27.95
Zm00001d009648_P001	Maize	plasma membrane	22.58	26.75
Zm00001d044080_P001	Maize	plastid	18.28	18.18

Protein Annotations

EntrezGene:100280642	MapMan:5.9.2	ProteinID:AQK63687.1	UniProt:B6SIZ2	EMBL:EU952707	EMBL:EU953053
EMBL:EU953507	EMBL:EU976613	EMBL:EU977102	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005811	GO:GO:0012511	GO:GO:0016020	GO:GO:0016021	InterPro:Oleosin
PFAM:PF01277	ScanProsite:PS00811	PANTHER:PTHR33203	PANTHER:PTHR33203:SF6	TMHMM:TMhelix	UniParc:UPI0000E64884
EnsemblPlantsGene:Zm00001d013494	EnsemblPlants:Zm00001d013494_P001	EnsemblPlants:Zm00001d013494_T001	SEG:seg	:	:

Description

oleosin3Oleosin Zm-II

Coordinates

chr5:-:12718250..12718810

Molecular Weight (calculated)

18334.1 Da

IEP (calculated)

9.721

GRAVY (calculated)

0.191

Length

186 amino acids

Sequence
(BLAST)

001: MADRDRSGIY GGAHATYGQQ QQQGGGGRPM GEQVKGMLHD KGPTASQALT VATLFPLGGL LLVLSGLALT ASVVGLAVAT PVFLIFSPVL VPAALLIGTA
101: VMGFLTSGAL GLGGLSSLTC LANTARQAFQ RTPDYVEEAH RRMAEAAAHA GHKTAQAGQA IQGRAQEAGA GGGAGAGAGG GGRASS

Best Arabidopsis Sequence Match ( AT3G01570.1 )
(BLAST)

001: MADVRTHSHQ LQVHPQRQHE GGIKVLYPQS GPSSTQVLAV FVGVPIGGTL LTIAGLTLAG SVIGLMLAFP LFLIFSPVIV PAAFVIGLAM TGFLASGAIG
101: LTGLSSMSWV LNYIRRAGQH IPEELEEAKH RLADMAEYVG QRTKDAGQTI EDKAHDVREA KTFDVRDRDT TKGTHNVRDT KTT

Arabidopsis Description

Oleosin 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS98]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.