Factsheet for VIT_17s0000g09000.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
vacuole 3
plastid 1
golgi 3
plasma membrane 3
extracellular 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	golgi, plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0066g00700.t01	Wine grape	golgi, plasma membrane, plastid, vacuole	50.0	50.71
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	48.59	46.31
VIT_14s0066g00710.t01	Wine grape	golgi, plasma membrane, plastid	49.3	44.59
Os03t0699000-01	Rice	plastid	53.52	44.19
VIT_04s0008g00540.t01	Wine grape	plasma membrane	45.07	43.84
Zm00001d033612_P001	Maize	cytosol, golgi, plasma membrane	51.41	41.48
VIT_16s0013g00880.t01	Wine grape	plasma membrane	38.73	38.19
Zm00001d013494_P001	Maize	cytosol	50.0	38.17
VIT_02s0234g00110.t01	Wine grape	plastid	35.21	37.59
GSMUA_Achr4P13900_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	45.07	33.68
VIT_17s0000g04210.t01	Wine grape	plastid	36.62	32.3
HORVU4Hr1G005800.1	Barley	plastid	53.52	31.8
KXG37789	Sorghum	plastid	50.7	27.91

Protein Annotations

EntrezGene:100256947	wikigene:100256947	MapMan:5.9.2	UniProt:A5B9G2	EMBL:AM451277	ProteinID:CAN80922
ProteinID:CAN80922.1	ProteinID:CCB42954	ProteinID:CCB42954.1	EMBL:FN594950	GO:GO:0000003	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005811	GO:GO:0006950	GO:GO:0007275
GO:GO:0008150	GO:GO:0009628	GO:GO:0009791	GO:GO:0010344	GO:GO:0012511	GO:GO:0016020
GO:GO:0016021	GO:GO:0019915	GO:GO:0050826	EntrezGene:LOC100256947	wikigene:LOC100256947	InterPro:Oleosin
PFAM:PF01277	ScanProsite:PS00811	PANTHER:PTHR33203	PANTHER:PTHR33203:SF6	TIGR:TC53946	TIGR:TC68191
TMHMM:TMhelix	UniParc:UPI0001524272	ArrayExpress:VIT_17s0000g09000	EnsemblPlantsGene:VIT_17s0000g09000	EnsemblPlants:VIT_17s0000g09000.t01	RefSeq:XP_002281381
RefSeq:XP_002281381.1	RefSeq:XP_003634256	RefSeq:XP_003634256.1	SEG:seg	:	:

Description

Oleosin [Source:UniProtKB/TrEMBL;Acc:A5B9G2]

Coordinates

chr17:-:10568632..10569354

Molecular Weight (calculated)

15008.6 Da

IEP (calculated)

10.671

GRAVY (calculated)

0.451

Length

142 amino acids

Sequence
(BLAST)

001: MAEHQQRPGF MPEKGPSTSQ VLAVITLFPV GGILLVLSGL TLAGTLIGLT VATPLFVIFS PILVPAALVL ALAITGFLTS GAFGITALSS LSWIVNYLRK
101: GRVTEQMEHA RWRVQEGAGQ LGMKAKEVGH GIQGKAQETT RT

Best Arabidopsis Sequence Match ( AT3G01570.1 )
(BLAST)

001: MADVRTHSHQ LQVHPQRQHE GGIKVLYPQS GPSSTQVLAV FVGVPIGGTL LTIAGLTLAG SVIGLMLAFP LFLIFSPVIV PAAFVIGLAM TGFLASGAIG
101: LTGLSSMSWV LNYIRRAGQH IPEELEEAKH RLADMAEYVG QRTKDAGQTI EDKAHDVREA KTFDVRDRDT TKGTHNVRDT KTT

Arabidopsis Description

Oleosin 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS98]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.