Factsheet for VIT_14s0066g00700.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid, vacuole

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
golgi 3
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, plastid, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	cytosol
MultiLoc:	golgi
Plant-mPloc:	golgi, plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0066g00710.t01	Wine grape	golgi, plasma membrane, plastid	60.0	53.5
Solyc02g086490.2.1	Tomato	extracellular	53.57	50.34
VIT_17s0000g09000.t01	Wine grape	golgi, plasma membrane, vacuole	50.71	50.0
PGSC0003DMT400032872	Potato	cytosol, golgi, plastid	55.0	46.39
Solyc12g010920.1.1	Tomato	cytosol, golgi, plasma membrane	53.57	43.6
AT3G27660.1	Thale cress	cytosol, golgi, plasma membrane	51.43	37.7
AT3G01570.1	Thale cress	plasma membrane	47.86	36.61
CDY49771	Canola	cytosol	48.57	36.17
Bra033021.1-P	Field mustard	golgi, peroxisome, plasma membrane	48.57	36.17
Bra039071.1-P	Field mustard	golgi, peroxisome, plasma membrane	47.86	35.64
CDY20040	Canola	cytosol	47.86	35.64
CDY03988	Canola	cytosol, endoplasmic reticulum, golgi	47.14	34.55
VIT_04s0008g00540.t01	Wine grape	plasma membrane	35.0	33.56
AT5G40420.1	Thale cress	cytosol	47.14	33.17
CDX67456	Canola	cytosol	47.14	33.0
CDY11685	Canola	cytosol	46.43	32.5
VIT_16s0013g00880.t01	Wine grape	plasma membrane	32.86	31.94
KRG94116	Soybean	nucleus	51.43	31.86
KRG93234	Soybean	nucleus	42.86	31.75
KRH07172	Soybean	endoplasmic reticulum, nucleus	48.57	30.49
Bra028458.1-P	Field mustard	golgi, nucleus, peroxisome	45.71	30.33
KRH56554	Soybean	endoplasmic reticulum, nucleus	42.14	29.8
Bra025577.1-P	Field mustard	cytosol, golgi, nucleus	46.43	29.55
VIT_02s0234g00110.t01	Wine grape	plastid	27.86	29.32
VIT_17s0000g04210.t01	Wine grape	plastid	32.14	27.95
CDY50118	Canola	cytosol	45.71	27.95

Protein Annotations

EntrezGene:100255962	wikigene:100255962	MapMan:5.9.2	UniProt:A5ALS9	EMBL:AM429725	ProteinID:CAN80216
ProteinID:CAN80216.1	ProteinID:CCB58482	ProteinID:CCB58482.1	EMBL:FN596252	GO:GO:0000003	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005811	GO:GO:0006950	GO:GO:0007275
GO:GO:0008150	GO:GO:0009628	GO:GO:0009791	GO:GO:0010344	GO:GO:0012511	GO:GO:0016020
GO:GO:0016021	GO:GO:0019915	GO:GO:0050826	EntrezGene:LOC100255962	wikigene:LOC100255962	InterPro:Oleosin
PFAM:PF01277	ScanProsite:PS00811	PANTHER:PTHR33203	PANTHER:PTHR33203:SF17	TIGR:TC59934	TMHMM:TMhelix
UniParc:UPI0001523B94	ArrayExpress:VIT_14s0066g00700	EnsemblPlantsGene:VIT_14s0066g00700	EnsemblPlants:VIT_14s0066g00700.t01	unigene:Vvi.7515	RefSeq:XP_002273158
RefSeq:XP_002273158.2	SEG:seg	:	:	:	:

Description

Oleosin [Source:UniProtKB/TrEMBL;Acc:A5ALS9]

Coordinates

chr14:+:27168533..27169135

Molecular Weight (calculated)

14755.3 Da

IEP (calculated)

9.726

GRAVY (calculated)

0.457

Length

140 amino acids

Sequence
(BLAST)

001: MAERDEQKGP SASKILAVIA LLPLGGTLLL LSGLTFVGSM VGLAVATPLF LLFSPVLVPA AIGIGLAVTG FLSSGALGVT ALSSLSWFLN YLRQLAAGMP
101: DYFQRVTDKL GRETKEMGQE LQSQAHEGWG KPTKRIQIGL

Best Arabidopsis Sequence Match ( AT3G01570.1 )
(BLAST)

001: MADVRTHSHQ LQVHPQRQHE GGIKVLYPQS GPSSTQVLAV FVGVPIGGTL LTIAGLTLAG SVIGLMLAFP LFLIFSPVIV PAAFVIGLAM TGFLASGAIG
101: LTGLSSMSWV LNYIRRAGQH IPEELEEAKH RLADMAEYVG QRTKDAGQTI EDKAHDVREA KTFDVRDRDT TKGTHNVRDT KTT

Arabidopsis Description

Oleosin 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS98]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.