Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20040 | Canola | cytosol | 80.63 | 81.91 |
| Bra039071.1-P | Field mustard | golgi, peroxisome, plasma membrane | 80.63 | 81.91 |
| CDY03988 | Canola | cytosol, endoplasmic reticulum, golgi | 81.68 | 81.68 |
| CDY49771 | Canola | cytosol | 80.1 | 81.38 |
| Bra033021.1-P | Field mustard | golgi, peroxisome, plasma membrane | 80.1 | 81.38 |
| AT5G40420.1 | Thale cress | cytosol | 62.83 | 60.3 |
| Solyc02g086490.2.1 | Tomato | extracellular | 42.93 | 55.03 |
| GSMUA_AchrUn_... | Banana | cytosol, golgi, plasma membrane | 42.41 | 54.36 |
| AT3G01570.1 | Thale cress | plasma membrane | 50.79 | 53.01 |
| PGSC0003DMT400032872 | Potato | cytosol, golgi, plastid | 45.03 | 51.81 |
| VIT_14s0066g00700.t01 | Wine grape | golgi, plasma membrane, plastid, vacuole | 37.7 | 51.43 |
| Solyc12g010920.1.1 | Tomato | cytosol, golgi, plasma membrane | 45.03 | 50.0 |
| VIT_14s0066g00710.t01 | Wine grape | golgi, plasma membrane, plastid | 38.74 | 47.13 |
| Os03t0699000-01 | Rice | plastid | 36.13 | 40.12 |
| Zm00001d033612_P001 | Maize | cytosol, golgi, plasma membrane | 36.65 | 39.77 |
| KRG93234 | Soybean | nucleus | 37.7 | 38.1 |
| KRG94116 | Soybean | nucleus | 45.03 | 38.05 |
| Zm00001d013494_P001 | Maize | cytosol | 36.65 | 37.63 |
| KRH07172 | Soybean | endoplasmic reticulum, nucleus | 43.46 | 37.22 |
| KRH56554 | Soybean | endoplasmic reticulum, nucleus | 37.17 | 35.86 |
| GSMUA_Achr4P13900_001 | Banana | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 35.6 | 35.79 |
| AT5G51210.1 | Thale cress | cytosol, golgi, plasma membrane | 24.61 | 33.33 |
| AT2G25890.2 | Thale cress | mitochondrion | 29.84 | 32.76 |
| HORVU4Hr1G005800.1 | Barley | plastid | 37.7 | 30.13 |
| KXG37789 | Sorghum | plastid | 37.7 | 27.91 |
| AT4G25140.1 | Thale cress | cytosol, golgi, plasma membrane | 24.61 | 27.17 |
| AT1G48990.1 | Thale cress | plastid | 23.04 | 26.04 |
| AT3G18570.1 | Thale cress | golgi, peroxisome, plasma membrane, plastid | 21.99 | 25.3 |
Protein Annotations
| MapMan:5.9.2 | EntrezGene:822388 | UniProt:A0A178V6F1 | ProteinID:AEE77349.1 | ProteinID:ANM64789.1 | ArrayExpress:AT3G27660 |
| EnsemblPlantsGene:AT3G27660 | RefSeq:AT3G27660 | TAIR:AT3G27660 | RefSeq:AT3G27660-TAIR-G | EnsemblPlants:AT3G27660.1 | TAIR:AT3G27660.1 |
| EMBL:AY054540 | EMBL:AY064657 | EMBL:AY085886 | ProteinID:BAB02690.1 | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005811 | GO:GO:0006950 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009791 | GO:GO:0009845 | GO:GO:0010344 |
| GO:GO:0012511 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019915 | GO:GO:0050826 | RefSeq:NP_001326794.1 |
| RefSeq:NP_189403.1 | ProteinID:OAP01777.1 | Symbol:OLEO4 | InterPro:Oleosin | PFAM:PF01277 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009029 | PO:PO:0009046 | PO:PO:0020100 | ScanProsite:PS00811 | PANTHER:PTHR33203 |
| PANTHER:PTHR33203:SF16 | UniProt:Q42431 | TMHMM:TMhelix | UniParc:UPI0000130C72 | EMBL:X91918 | EMBL:Z27260 |
| EMBL:Z29859 | EMBL:Z54164 | SEG:seg | : | : | : |
Description
OL2Oleosin 20.3 kDa [Source:UniProtKB/Swiss-Prot;Acc:Q42431]
Coordinates
chr3:+:10243244..10245023
Molecular Weight (calculated)
20314.4 Da
IEP (calculated)
7.812
GRAVY (calculated)
-0.043
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MANVDRDRRV HVDRTDKRVH QPNYEDDVGF GGYGGYGAGS DYKSRGPSTN QILALIAGVP IGGTLLTLAG LTLAGSVIGL LVSIPLFLLF SPVIVPAALT
101: IGLAVTGILA SGLFGLTGLS SVSWVLNYLR GTSDTVPEQL DYAKRRMADA VGYAGMKGKE MGQYVQDKAH EARETEFMTE THEPGKARRG S
101: IGLAVTGILA SGLFGLTGLS SVSWVLNYLR GTSDTVPEQL DYAKRRMADA VGYAGMKGKE MGQYVQDKAH EARETEFMTE THEPGKARRG S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.