Factsheet for Zm00001d022148_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d037747_P001
Zm00001d039455_P002
Zm00001d044931_P001
Zm00001d048131_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G43230.1	Zm00001d037747_P001	AT3G13710.1	21798944
AT3G43230.1	Zm00001d039455_P002	AT3G13710.1	21798944
AT3G43230.1	Zm00001d044931_P001	AT4G33350.1	21798944
AT3G43230.1	Zm00001d048131_P001	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU90261	Sorghum	cytosol	95.67	95.88
Os07t0616900-01	Rice	cytosol	84.2	84.2
TraesCS2B01G194100.1	Wheat	cytosol	82.68	82.86
TraesCS2D01G175500.1	Wheat	cytosol	82.03	82.21
HORVU2Hr1G030860.2	Barley	cytosol	81.82	82.0
TraesCS2A01G168100.1	Wheat	cytosol	81.6	81.78
GSMUA_Achr1P21800_001	Banana	extracellular, golgi, plastid	15.8	73.74
GSMUA_AchrUn_...	Banana	cytosol, extracellular	11.26	68.42
GSMUA_AchrUn_...	Banana	extracellular	10.39	64.0
GSMUA_Achr8P30460_001	Banana	cytosol	65.15	63.91
VIT_11s0016g00400.t01	Wine grape	cytosol	62.55	60.84
Solyc07g017500.2.1	Tomato	cytosol	63.42	60.41
KRH02544	Soybean	cytosol	61.47	58.68
KRH19396	Soybean	cytosol	60.82	58.06
AT3G43230.1	Thale cress	cytosol	60.61	57.73
Zm00001d019348_P001	Maize	cytosol	59.09	55.04
PGSC0003DMT400041172	Potato	cytosol	5.63	49.06
CDY30955	Canola	cytosol	57.14	46.23
CDY44837	Canola	cytosol	57.79	44.65
Bra019445.1-P	Field mustard	cytosol	57.58	41.56
Zm00001d016234_P001	Maize	cytosol	43.07	37.34
Zm00001d053541_P002	Maize	cytosol	41.99	37.24
Zm00001d046304_P001	Maize	cytosol, plastid	41.77	27.77

Protein Annotations

EntrezGene:100281748	Gene3D:3.30.40.10	MapMan:35.2	UniProt:A0A1D6IJP4	GO:GO:0003674	GO:GO:0005488
GO:GO:0046872	InterPro:IPR013083	InterPro:IPR017455	ProteinID:ONM59662.1	PFAM:PF01363	PFAM:PF04366
PFscan:PS50178	PANTHER:PTHR15629	PANTHER:PTHR15629:SF25	SMART:SM00064	SUPFAM:SSF57903	UniParc:UPI0002209AEC
InterPro:Ysc84_actin-binding	EnsemblPlantsGene:Zm00001d022148	EnsemblPlants:Zm00001d022148_P001	EnsemblPlants:Zm00001d022148_T001	InterPro:Znf_FYVE	InterPro:Znf_FYVE-rel
InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

fowlpox viral protein homolog1 fowlpox viral protein homolog1

Coordinates

chr7:+:171253896..171257994

Molecular Weight (calculated)

50277.1 Da

IEP (calculated)

7.741

GRAVY (calculated)

-0.137

Length

462 amino acids

Sequence
(BLAST)

001: MGTPNEMMAY SSLSKMDTSQ NHGAALSNVV AGNNYPVQDY LYEQASEPDF PEYDSRDDLF APTRASPKVN LNTVLGGLVS IVTGVNKSED DASQHESFST
101: DISFLRSDKN GNVNVHPSVC VPSAPPLLEA NALQYSAYKE VLLADPPEWL PDSSANVCLQ CNLPFTALTR GRHHCRFCGG IFCKNCSKGR CLMPMKFRIR
201: DPQRVCDACY ERLDPLQGLL INYNSNCMQQ AKHDVMDWTS TRSWLNMPVG VSMEYEIYKA TNTMKKYCQV ARLNPEKSIP SSILKGAKGL AILTVAKAGA
301: VLTYKVGTGL VVARRSDGSW SAPSAILSVG LGWGVQIGGE LTDFIIVLHD RKAVKAFSSR IHLSLGAGLS AAAGPIGRAF EADVRASEKG SGICYTYSCT
401: KGAFVGVSLE GNVVTTRMET NLRFYGDAYL TATDILFGRV ERPRAAQPLY SALDDLFSKM VC

Best Arabidopsis Sequence Match ( AT3G43230.1 )
(BLAST)

001: MATLNGKASP YSEENIKFKY DDYDDDDDDD DGSGSGSGGG YEDGPKWSVQ SIPTKKEVEY PIIDSGDYVD DGYDSSGELS TTTTPPIQGN EKPEVNLKNV
101: LTGLIAIVTG RNKNPLDQKN PSSNVSFLGS GTNGDTFVHS SVYIPSAPPL LEPSGINYSV YKELLEAEPP EWLPDSLAST CMQCSTPFTA ITCGRHHCRF
201: CGGIFCRNCS KGRCLMPSRF RERNPQRVCD SCYERLDPLQ CVLINSISNA VQVAKHDVVD WTCSRGWLNL PVGLSMEDEI YKAANTLRGY CQVARLDPEK
301: SIPHAVLSRA KGLAIITVAK AGALLSYKLG TGLVISRRPD GSWSAPSAIL SVGLGWGAQI GGELMDFIIV LHDVKAVKTF CSRMHFSLGA GCSAAAGPIG
401: RVLEADLRAG DKGSGVCYTY SRSKGAFVGV SLEGNLVATR RDMNVKFYGD PYLSTSDILL GMVDQPKAAE PLYTALRELY ARLRP

Arabidopsis Description

RING/FYVE/PHD-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q9LXL1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.