Factsheet for Zm00001d016234_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04807	Sorghum	cytosol	84.05	84.21
Zm00001d053541_P002	Maize	cytosol	81.99	83.88
Os02t0233100-01	Rice	cytosol	69.42	69.16
GSMUA_Achr5P06610_001	Banana	cytosol	56.66	62.79
GSMUA_Achr7P13820_001	Banana	cytosol	56.47	57.44
AT1G29800.1	Thale cress	cytosol	53.66	56.08
VIT_19s0014g00860.t01	Wine grape	cytosol	53.66	54.79
VIT_10s0003g01800.t01	Wine grape	cytosol	53.28	54.1
KRH21202	Soybean	cytosol	53.28	52.59
KRH11072	Soybean	cytosol	52.53	51.85
Bra032337.1-P	Field mustard	cytosol	53.28	47.25
Zm00001d046304_P001	Maize	cytosol, plastid	60.04	46.04
CDX99856	Canola	cytosol	53.47	45.02
CDY26313	Canola	cytosol	53.28	44.94
Zm00001d022148_P001	Maize	cytosol	37.34	43.07
Solyc02g071980.2.1	Tomato	cytosol	53.28	41.16
PGSC0003DMT400073054	Potato	cytosol	52.91	40.87
Zm00001d019348_P001	Maize	cytosol	37.9	40.73

Protein Annotations

EntrezGene:100383394	Gene3D:3.30.40.10	MapMan:35.2	ProteinID:AQK70350.1	EMBL:BT067100	UniProt:C0PFN1
GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	InterPro:IPR013083	InterPro:IPR017455	PFAM:PF01363
PFAM:PF04366	PFscan:PS50178	PANTHER:PTHR15629	PANTHER:PTHR15629:SF13	SMART:SM00064	SUPFAM:SSF57903
UniParc:UPI000195CA4F	InterPro:Ysc84_actin-binding	EnsemblPlantsGene:Zm00001d016234	EnsemblPlants:Zm00001d016234_P001	EnsemblPlants:Zm00001d016234_T001	InterPro:Znf_FYVE
InterPro:Znf_FYVE-rel	InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

RING/FYVE/PHD-type zinc finger family protein

Coordinates

chr5:-:151507764..151512142

Molecular Weight (calculated)

57377.9 Da

IEP (calculated)

6.099

GRAVY (calculated)

-0.223

Length

533 amino acids

Sequence
(BLAST)

001: MAGTERLHRP IDPPRPAGSR SVVVGAGGSP ARWDDDNDDC GGGGRVEGLA GLHIFDQEAE ESPTKNDMAN SLDTNCTPIA KGCNTETTET SVESEPVNVL
101: NLLHDHTGIW VPVSVPPMTA LASEDWHRGF RCNGGHFPEE EFSWELDEDN KEMTMWDVFA DMAVAAKDKV ISAAKYEYGR CGMSTVSNFF LQEAWKDMAQ
201: TLVDANTGIA NELLETEPTK WLPDSAATSC MLCGVRFHPI MCSRHHCRFC GGVFCNGCSN GRSLMPPKFR TADPQRVCDV CGVRLESIQP QLMNQISRAS
301: QLPTRDVTDL STLRSWLNFP WSHTMEYEIY KAANSLRSYC KVGRLKPEKS IPDTILRQAK GLAIVTVVKV GMMVTYKLGS GLVVARRVDG SWSPPSAIST
401: CGIGYGAQAG GEIADFIIVL RNTDAIKTFS GKAHLSVGAG VSASAGHVGR AAEADFRAGD GGYAACYTYS CSKGAFVGCA LNGGIVSTRD TENARFYGGP
501: VQASDILLGS TARPPAASPL YKALSELFDK IGK

Best Arabidopsis Sequence Match ( AT1G29800.2 )
(BLAST)

001: MDERDREIRA SHGDSNAGNV VSQSIENTRE EDSGSCEGFV EESKRLEPEQ QKHGKYFFYD TPLSEETGVW IPVSVPPMLE PDHEEWSRGL SFNGGYFPEG
101: DMGWDQIFDE DKELTMWDVI VDMLLAARGK ASALSSGNLE RCGINFLSGH LLEQAWQDMA HTLTEANFGN AREILETEPP KWLPDSAASA CMLCSVRFHP
201: IMCSRHHCRY CGGIFCRDCS KGKSLVPVKF RVSDPQRVCD VCFVRLESVQ PYLMDQVSPA AQLPTHDLTD LSTLRSWVNF PWGQSMEYEI YKATNTLRGY
301: ITKVGSSRTE RSIPDAILRQ AKGLAVITVA RVGVMVTYKI GTGLVVARRD DGSWSPPSAI SSFGLGWGAQ AGGEFIDFII VLRTREAIQT FGSNTHLVVG
401: AGLSAAVGVT GRAVEADIRA GSGGYAACYT YSCSKGAFVG CSLEGSIFTT RTSENSRFYG SQSLAASDIL LGSLPRPPAA AALYRALGDL YQKMGR

Arabidopsis Description

RING/FYVE/PHD-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q84WW7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.