Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400073054 | Potato | cytosol | 92.9 | 92.9 |
| GSMUA_Achr5P06610_001 | Banana | cytosol | 46.96 | 67.36 |
| VIT_10s0003g01800.t01 | Wine grape | cytosol | 50.58 | 66.48 |
| AT1G29800.1 | Thale cress | cytosol | 48.12 | 65.1 |
| KRH21202 | Soybean | cytosol | 50.58 | 64.63 |
| KRH11072 | Soybean | cytosol | 49.71 | 63.52 |
| GSMUA_Achr7P13820_001 | Banana | cytosol | 47.39 | 62.4 |
| Bra032337.1-P | Field mustard | cytosol | 48.55 | 55.74 |
| EES04807 | Sorghum | cytosol | 42.75 | 55.45 |
| Zm00001d053541_P002 | Maize | cytosol | 41.45 | 54.89 |
| TraesCS7D01G367900.1 | Wheat | cytosol | 41.88 | 54.63 |
| Os02t0233100-01 | Rice | cytosol | 42.17 | 54.39 |
| CDX99856 | Canola | cytosol | 49.71 | 54.19 |
| TraesCS7B01G272800.1 | Wheat | cytosol | 41.16 | 53.89 |
| TraesCS7A01G354900.1 | Wheat | cytosol | 41.16 | 53.69 |
| CDY26313 | Canola | cytosol | 48.99 | 53.48 |
| Zm00001d016234_P001 | Maize | cytosol | 41.16 | 53.28 |
| Os06t0552400-02 | Rice | cytosol | 41.59 | 52.28 |
| EER89914 | Sorghum | cytosol | 40.43 | 52.25 |
| HORVU7Hr1G088960.1 | Barley | endoplasmic reticulum | 41.45 | 47.12 |
| Solyc07g017500.2.1 | Tomato | cytosol | 30.14 | 42.89 |
| Zm00001d046304_P001 | Maize | cytosol, plastid | 40.29 | 40.0 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 |
| GO:GO:0032587 | GO:GO:0035091 | GO:GO:0046872 | GO:GO:1900027 | InterPro:IPR013083 | InterPro:IPR017455 |
| UniProt:K4B8H3 | PFAM:PF01363 | PFAM:PF04366 | PFscan:PS50178 | PANTHER:PTHR15629 | PANTHER:PTHR15629:SF9 |
| SMART:SM00064 | SUPFAM:SSF57903 | EnsemblPlantsGene:Solyc02g071980.2 | EnsemblPlants:Solyc02g071980.2.1 | UniParc:UPI00027691E8 | InterPro:Ysc84_actin-binding |
| InterPro:Znf_FYVE | InterPro:Znf_FYVE-rel | InterPro:Znf_FYVE_PHD | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
No Description!
Coordinates
chr2:+:41307258..41312662
Molecular Weight (calculated)
75495.6 Da
IEP (calculated)
5.408
GRAVY (calculated)
-0.402
Length
690 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPHHNSDSK FATPGEVDPS STSYSRVSNP LVQSDCSKFG DNRGLDDFDP VIGSNIVKTG KHEEYNIVAV HLMNGTPKNT SLMSRLDTQA EELFSKQSFH
101: DTGEASERYH MDGWKGKSEE DSITLRQNNI LRSSEKIISS NCDKSRKCGS ESFGQSAGHG NKDKSYIMGK PVGGQQETDH DSPLCTKENY EKEAHTTNGM
201: VKAEVSNVNL TQQTNGSDIK INLLYPQLAE NIDCATQSSQ NAEGSICHQN QEKYFCYDSP LFGETGAWIP VSVPPMSESE HDEWSRGFCS NGGYLPEGDT
301: DWNQCMGEDK ELTMWDVVLD MLLAARGKVQ SLASGDIVGN MSWISSHLIE QAWKEMAQTL TEANFGNAQE ILEADPPKWL PDSASSTCML CNVRFHPIMC
401: SRHHCRFCGG LFCNECTKGR SLLPEKFRTG EPQRVCDVCF VRLESVQPYL MDQVSRAAQL PTHDLTDLST LRSWVNFPWG QSMEYEIYKA ANTIRGYEKI
501: GLLSSEKRIP EAILQNARGL AILTVVKVGV MVTYNIGTGL VIARREDGSW SPPSAISSFG VGWGAQVGGE LTDFIIVLRT SDAVKTFGGD AHLSVGAGVS
601: AAAGIIGRTA EADLRAGTAG YAACYTYSCS KGAFVGCSLQ GSVVTTRTRE NSRFYGSQSI KASEILLGSL PRPPAAAALY RALTDLYQKL
101: DTGEASERYH MDGWKGKSEE DSITLRQNNI LRSSEKIISS NCDKSRKCGS ESFGQSAGHG NKDKSYIMGK PVGGQQETDH DSPLCTKENY EKEAHTTNGM
201: VKAEVSNVNL TQQTNGSDIK INLLYPQLAE NIDCATQSSQ NAEGSICHQN QEKYFCYDSP LFGETGAWIP VSVPPMSESE HDEWSRGFCS NGGYLPEGDT
301: DWNQCMGEDK ELTMWDVVLD MLLAARGKVQ SLASGDIVGN MSWISSHLIE QAWKEMAQTL TEANFGNAQE ILEADPPKWL PDSASSTCML CNVRFHPIMC
401: SRHHCRFCGG LFCNECTKGR SLLPEKFRTG EPQRVCDVCF VRLESVQPYL MDQVSRAAQL PTHDLTDLST LRSWVNFPWG QSMEYEIYKA ANTIRGYEKI
501: GLLSSEKRIP EAILQNARGL AILTVVKVGV MVTYNIGTGL VIARREDGSW SPPSAISSFG VGWGAQVGGE LTDFIIVLRT SDAVKTFGGD AHLSVGAGVS
601: AAAGIIGRTA EADLRAGTAG YAACYTYSCS KGAFVGCSLQ GSVVTTRTRE NSRFYGSQSI KASEILLGSL PRPPAAAALY RALTDLYQKL
001: MDERDREIRA SHGDSNAGNV VSQSIENTRE EDSGSCEGFV EESKRLEPEQ QKHGKYFFYD TPLSEETGVW IPVSVPPMLE PDHEEWSRGL SFNGGYFPEG
101: DMGWDQIFDE DKELTMWDVI VDMLLAARGK ASALSSGNLE RCGINFLSGH LLEQAWQDMA HTLTEANFGN AREILETEPP KWLPDSAASA CMLCSVRFHP
201: IMCSRHHCRY CGGIFCRDCS KGKSLVPVKF RVSDPQRVCD VCFVRLESVQ PYLMDQVSPA AQLPTHDLTD LSTLRSWVNF PWGQSMEYEI YKATNTLRGY
301: ITKVGSSRTE RSIPDAILRQ AKGLAVITVA RVGVMVTYKI GTGLVVARRD DGSWSPPSAI SSFGLGWGAQ AGGEFIDFII VLRTREAIQT FGSNTHLVVG
401: AGLSAAVGVT GRAVEADIRA GSGGYAACYT YSCSKGAFVG CSLEGSIFTT RTSENSRFYG SQSLAASDIL LGSLPRPPAA AALYRALGDL YQKMGSETVR
501: SPAISPLSED
101: DMGWDQIFDE DKELTMWDVI VDMLLAARGK ASALSSGNLE RCGINFLSGH LLEQAWQDMA HTLTEANFGN AREILETEPP KWLPDSAASA CMLCSVRFHP
201: IMCSRHHCRY CGGIFCRDCS KGKSLVPVKF RVSDPQRVCD VCFVRLESVQ PYLMDQVSPA AQLPTHDLTD LSTLRSWVNF PWGQSMEYEI YKATNTLRGY
301: ITKVGSSRTE RSIPDAILRQ AKGLAVITVA RVGVMVTYKI GTGLVVARRD DGSWSPPSAI SSFGLGWGAQ AGGEFIDFII VLRTREAIQT FGSNTHLVVG
401: AGLSAAVGVT GRAVEADIRA GSGGYAACYT YSCSKGAFVG CSLEGSIFTT RTSENSRFYG SQSLAASDIL LGSLPRPPAA AALYRALGDL YQKMGSETVR
501: SPAISPLSED
Arabidopsis Description
RING/FYVE/PHD-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q84WW7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.