Factsheet for GSMUA_Achr7P13820_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P06610_001	Banana	cytosol	70.23	76.51
GSMUA_Achr1P21800_001	Banana	extracellular, golgi, plastid	12.4	65.66
VIT_19s0014g00860.t01	Wine grape	cytosol	63.17	63.41
AT1G29800.1	Thale cress	cytosol	60.88	62.55
VIT_10s0003g01800.t01	Wine grape	cytosol	61.45	61.33
KRH21202	Soybean	cytosol	61.83	60.0
KRH11072	Soybean	cytosol	61.26	59.44
TraesCS7D01G367900.1	Wheat	cytosol	58.21	57.66
TraesCS7B01G272800.1	Wheat	cytosol	57.82	57.5
TraesCS7A01G354900.1	Wheat	cytosol	58.02	57.47
EES04807	Sorghum	cytosol	58.21	57.33
Os02t0233100-01	Rice	cytosol	58.21	57.01
Zm00001d016234_P001	Maize	cytosol	57.44	56.47
Zm00001d053541_P002	Maize	cytosol	55.53	55.85
Os06t0552400-02	Rice	cytosol	58.02	55.37
GSMUA_AchrUn_...	Banana	cytosol, extracellular	8.02	55.26
EER89914	Sorghum	cytosol	56.3	55.24
Bra032337.1-P	Field mustard	cytosol	61.64	53.74
GSMUA_AchrUn_...	Banana	extracellular	7.63	53.33
CDY26313	Canola	cytosol	61.64	51.11
CDX99856	Canola	cytosol	61.64	51.03
HORVU7Hr1G088960.1	Barley	endoplasmic reticulum	57.44	49.59
Solyc02g071980.2.1	Tomato	cytosol	62.4	47.39
PGSC0003DMT400073054	Potato	cytosol	62.21	47.25
GSMUA_Achr3P10170_001	Banana	mitochondrion	37.79	46.92
GSMUA_Achr8P30460_001	Banana	cytosol	38.55	42.89
Zm00001d046304_P001	Maize	cytosol, plastid	55.92	42.16

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr7G13820_001
EnsemblPlants:GSMUA_Achr7P13820_001	EnsemblPlants:GSMUA_Achr7T13820_001	InterPro:IPR013083	InterPro:IPR017455	UniProt:M0THB9	PFAM:PF01363
PFAM:PF04366	PFscan:PS50178	PANTHER:PTHR15629	PANTHER:PTHR15629:SF9	SMART:SM00064	SUPFAM:SSF57903
UniParc:UPI0002957B8F	InterPro:Ysc84_actin-binding	InterPro:Znf_FYVE	InterPro:Znf_FYVE-rel	InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

FYVE zinc finger domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G13820_001]

Coordinates

chr7:+:11084097..11088096

Molecular Weight (calculated)

57121.0 Da

IEP (calculated)

5.225

GRAVY (calculated)

-0.166

Length

524 amino acids

Sequence
(BLAST)

001: MVGCNNLYPV IEVEEPMSSR TTLMSMEAID PGLSDVAKPG PEVTPSSPEI PDRMEGSHNN SSSSKTEKPY ISEMVQDPAA QKSGKYFYYD SPLYEESGYW
101: IPVSVPPMLE GDHDEWSKGL HSDGGYFPEG EFSWDQFSGE DKEMTMWDVV SEMLIVARGK VSVLTSGELR SCRVSCISTD LLQETWKEMA NTLAEANFGQ
201: SNEILETKPP KWLSDSAAAA CMLCNIHFHP IMCSRHHCRF CGGIFCNDCS KGRSLLPPKF RISDPQRVCD VCCVRLEPIQ PYLMDQVSHA SQLPTHDLTD
301: LSTLRSWLNF PWGRTMEYEI YKAANIIHGY NKVGSLKPEK SIPDAILKEA RGLAILTVVN VGLMVTYKVG TGLVVARRED GSWSPPSAIS SFGCGWGAQA
401: GGELTDYVIV LRNKDAVRIF SGSAHLSVGA GLSAAAGIVG RTAEADLRAG DGGHAACYTY SCSKGAFVGC ALNGSMVTTR TSENFRFYGA PVKASDILLG
501: SMPMPPAAAV LYRALSDLFL KLEN

Best Arabidopsis Sequence Match ( AT1G29800.1 )
(BLAST)

001: MDERDREIRA SHGDSNAGNV VSQSIENTRE EDSGSCEGFV EESKRLEPEQ QKHGKYFFYD TPLSEETGVW IPVSVPPMLE PDHEEWSRGL SFNGGYFPEG
101: DMGWDQIFDE DKELTMWDVI VDMLLAARGK ASALSSGNLE RCGINFLSGH LLEQAWQDMA HTLTEANFGN AREILETEPP KWLPDSAASA CMLCSVRFHP
201: IMCSRHHCRY CGGIFCRDCS KGKSLVPVKF RVSDPQRVCD VCFVRLESVQ PYLMDQVSPA AQLPTHDLTD LSTLRSWVNF PWGQSMEYEI YKATNTLRGY
301: ITKVGSSRTE RSIPDAILRQ AKGLAVITVA RVGVMVTYKI GTGLVVARRD DGSWSPPSAI SSFGLGWGAQ AGGEFIDFII VLRTREAIQT FGSNTHLVVG
401: AGLSAAVGVT GRAVEADIRA GSGGYAACYT YSCSKGAFVG CSLEGSIFTT RTSENSRFYG SQSLAASDIL LGSLPRPPAA AALYRALGDL YQKMGSETVR
501: SPAISPLSED

Arabidopsis Description

RING/FYVE/PHD-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q84WW7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.