Factsheet for HORVU7Hr1G088960.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 1
endoplasmic reticulum 3
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
TargetP:	mitochondrion
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G272800.1	Wheat	cytosol	79.24	91.27
TraesCS7D01G367900.1	Wheat	cytosol	78.91	90.55
TraesCS7A01G354900.1	Wheat	cytosol	78.91	90.55
EER89914	Sorghum	cytosol	63.92	72.66
Os06t0552400-02	Rice	cytosol	63.59	70.31
GSMUA_Achr5P06610_001	Banana	cytosol	48.6	61.33
GSMUA_Achr7P13820_001	Banana	cytosol	49.59	57.44
AT1G29800.1	Thale cress	cytosol	46.46	55.29
VIT_19s0014g00860.t01	Wine grape	cytosol	47.12	54.79
KRH21202	Soybean	cytosol	48.6	54.63
Zm00001d046304_P001	Maize	cytosol, plastid	62.44	54.53
KRH11072	Soybean	cytosol	47.78	53.7
VIT_10s0003g01800.t01	Wine grape	cytosol	46.13	53.33
Bra032337.1-P	Field mustard	cytosol	45.96	46.42
CDX99856	Canola	cytosol	46.79	44.87
CDY26313	Canola	cytosol	46.13	44.3
PGSC0003DMT400073054	Potato	cytosol	47.61	41.88
HORVU2Hr1G030860.2	Barley	cytosol	31.8	41.87
Solyc02g071980.2.1	Tomato	cytosol	47.12	41.45
HORVU3Hr1G016350.1	Barley	cytosol	33.28	40.97

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.2	UniProt:A0A287X8W3	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872
EnsemblPlantsGene:HORVU7Hr1G088960	EnsemblPlants:HORVU7Hr1G088960.1	InterPro:IPR013083	InterPro:IPR017455	PFAM:PF01363	PFAM:PF04366
PFscan:PS50178	PANTHER:PTHR15629	PANTHER:PTHR15629:SF9	SMART:SM00064	SUPFAM:SSF57903	UniParc:UPI000B4858EC
InterPro:Ysc84_actin-binding	InterPro:Znf_FYVE	InterPro:Znf_FYVE-rel	InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

No Description!

Coordinates

chrchr7H:+:540257078..540263948

Molecular Weight (calculated)

66039.9 Da

IEP (calculated)

7.122

GRAVY (calculated)

-0.237

Length

607 amino acids

Sequence
(BLAST)

001: VVYFRLHAHT IVALGYTLSF LEILTCPSRL PPSFQLARHL RLPHHAKSNP KPRKKAPNRK PSPPHPILPR RPIRSGAGPP IPCGGMEGAD RLYPSIEPYD
101: LEPPELDAAA EARACDRPVR WDEEPKEGIH ICEQGAKDNP VEHDMEDHLS VVNIFESDDE MAASKKSGEN VYSDCPLRQQ TGTWVPPSVP PMTKHDHEEW
201: QKGFVSNAGY FAEDEYKWDI DEDIREMTMW DVFAEMAVAG KDKLLSVASY DFGRHSMSLV SHFLLQAALD DNSQTLAEAS VGSEHALLET EPTKWLPDSA
301: APSCMLCGAR FHPVICSRHH CRFCGGIFCG GCSKGRSLMP PKFGTSDPQR VCDVCGVRLE CIQPYLMNQI SRACQLPTKD LTDLSTLRSW LNLPWAPTME
401: YEIYKAANSI HGYCKVGKLN PEKSIPDSIL RQAKGLAIIT VVKVGMMVTY KIGTGLVIAR RADGSWSPPS AISTCGVGYG AQAGAELADF IIVLRNTDAI
501: KTFSGNAHLS LGAGFGASAG HLGRVAEADF RAGDGGYAAC YTYSCSKGAF VGCALNGSVV STRNSENARF YGGPVKASEI LLGSLAKPPA AATLYKALST
601: LFDKIGK

Best Arabidopsis Sequence Match ( AT1G29800.2 )
(BLAST)

001: MDERDREIRA SHGDSNAGNV VSQSIENTRE EDSGSCEGFV EESKRLEPEQ QKHGKYFFYD TPLSEETGVW IPVSVPPMLE PDHEEWSRGL SFNGGYFPEG
101: DMGWDQIFDE DKELTMWDVI VDMLLAARGK ASALSSGNLE RCGINFLSGH LLEQAWQDMA HTLTEANFGN AREILETEPP KWLPDSAASA CMLCSVRFHP
201: IMCSRHHCRY CGGIFCRDCS KGKSLVPVKF RVSDPQRVCD VCFVRLESVQ PYLMDQVSPA AQLPTHDLTD LSTLRSWVNF PWGQSMEYEI YKATNTLRGY
301: ITKVGSSRTE RSIPDAILRQ AKGLAVITVA RVGVMVTYKI GTGLVVARRD DGSWSPPSAI SSFGLGWGAQ AGGEFIDFII VLRTREAIQT FGSNTHLVVG
401: AGLSAAVGVT GRAVEADIRA GSGGYAACYT YSCSKGAFVG CSLEGSIFTT RTSENSRFYG SQSLAASDIL LGSLPRPPAA AALYRALGDL YQKMGR

Arabidopsis Description

RING/FYVE/PHD-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q84WW7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.