CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G272800.1	Wheat	cytosol	72.47	73.43
TraesCS7D01G367900.1	Wheat	cytosol	72.47	73.16
TraesCS7A01G354900.1	Wheat	cytosol	72.47	73.16
Os06t0552400-02	Rice	cytosol	71.16	69.22
Zm00001d046304_P001	Maize	cytosol, plastid	88.58	68.06
EES04807	Sorghum	cytosol	64.42	64.66
HORVU7Hr1G088960.1	Barley	endoplasmic reticulum	72.66	63.92
GSMUA_Achr5P06610_001	Banana	cytosol	55.06	61.12
GSMUA_Achr7P13820_001	Banana	cytosol	55.24	56.3
VIT_19s0014g00860.t01	Wine grape	cytosol	52.81	54.02
AT1G29800.1	Thale cress	cytosol	51.12	53.53
KRH21202	Soybean	cytosol	53.75	53.15
KRH11072	Soybean	cytosol	52.62	52.04
VIT_10s0003g01800.t01	Wine grape	cytosol	51.12	52.0
Bra032337.1-P	Field mustard	cytosol	50.75	45.09
CDX99856	Canola	cytosol	50.94	42.97
CDY26313	Canola	cytosol	50.75	42.88
OQU90261	Sorghum	cytosol	36.89	42.73
PGSC0003DMT400073054	Potato	cytosol	53.0	41.01
Solyc02g071980.2.1	Tomato	cytosol	52.25	40.43
OQU77712	Sorghum	cytosol	23.22	38.51
EER96209	Sorghum	cytosol	35.77	38.51

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.2	EntrezGene:8076695	UniProt:C5Z4I2	EnsemblPlants:EER89914	ProteinID:EER89914
ProteinID:EER89914.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0032587
GO:GO:0035091	GO:GO:0046872	GO:GO:1900027	InterPro:IPR013083	InterPro:IPR017455	PFAM:PF01363
PFAM:PF04366	PFscan:PS50178	PANTHER:PTHR15629	PANTHER:PTHR15629:SF9	SMART:SM00064	EnsemblPlantsGene:SORBI_3010G164000
SUPFAM:SSF57903	UniParc:UPI0001A8984B	RefSeq:XP_002438547.1	InterPro:Ysc84_actin-binding	InterPro:Znf_FYVE	InterPro:Znf_FYVE-rel
InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:48243337..48248160

Molecular Weight (calculated)

57796.5 Da

IEP (calculated)

4.539

GRAVY (calculated)

-0.210

Length

534 amino acids

Sequence
(BLAST)

001: MAGTDRLYPP IEPYDLEPPQ VPAAAGEEEA GVCDAPVMWD DEPDASPSPS PEAGPHIFEE GARDPPPEAF KEERLGVVNS DEFSGEMTTV KESGENDYDG
101: FPSCEQTGII WVPPSVPPMT KHDHDEWQKG FGYNSAGFLE EEDKWDIDEE NLEMTMWDVL SEMVVAGKDK VLSIASFDLG TYGMSMISDF FLEEALKDKA
201: QTLEDVSAGS EHALLETEPA KWLPDSASPS CMLCGARFHP IICTRHHCRF CGGIFCGGCS KGRSLMPPKF MTSDPQRVCD VCGVRLECIQ PYLMNRFSRA
301: CQLPTQDLTD LSTLRSWINI PWAVRMEYEI YKAANSIHGY CKVGELKPEK SIPDSILRQA KGLAIITEVK VGMMLTYKIG TGLVVARRGD GSWSPPSAIS
401: TCGLGYGVQA GGELADYIIV LRNTDAIKTF SGNAHMSIGA GISASAGHFG RAAEADFRAG DGGYAACYTY SCSKGAFVGC ALNGSVVSTR DSVNARFYGG
501: PIKASEILLG SLPKPPAAAT LYKALSVLFD KINK

Best Arabidopsis Sequence Match ( AT1G29800.2 )
(BLAST)

001: MDERDREIRA SHGDSNAGNV VSQSIENTRE EDSGSCEGFV EESKRLEPEQ QKHGKYFFYD TPLSEETGVW IPVSVPPMLE PDHEEWSRGL SFNGGYFPEG
101: DMGWDQIFDE DKELTMWDVI VDMLLAARGK ASALSSGNLE RCGINFLSGH LLEQAWQDMA HTLTEANFGN AREILETEPP KWLPDSAASA CMLCSVRFHP
201: IMCSRHHCRY CGGIFCRDCS KGKSLVPVKF RVSDPQRVCD VCFVRLESVQ PYLMDQVSPA AQLPTHDLTD LSTLRSWVNF PWGQSMEYEI YKATNTLRGY
301: ITKVGSSRTE RSIPDAILRQ AKGLAVITVA RVGVMVTYKI GTGLVVARRD DGSWSPPSAI SSFGLGWGAQ AGGEFIDFII VLRTREAIQT FGSNTHLVVG
401: AGLSAAVGVT GRAVEADIRA GSGGYAACYT YSCSKGAFVG CSLEGSIFTT RTSENSRFYG SQSLAASDIL LGSLPRPPAA AALYRALGDL YQKMGR

Arabidopsis Description

RING/FYVE/PHD-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q84WW7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.