Factsheet for TraesCS7A01G354900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G272800.1	Wheat	cytosol	95.09	95.45
TraesCS7D01G367900.1	Wheat	cytosol	95.27	95.27
HORVU7Hr1G088960.1	Barley	endoplasmic reticulum	90.55	78.91
EER89914	Sorghum	cytosol	73.16	72.47
Os06t0552400-02	Rice	cytosol	74.29	71.58
GSMUA_Achr5P06610_001	Banana	cytosol	55.01	60.5
GSMUA_Achr7P13820_001	Banana	cytosol	57.47	58.02
AT1G29800.1	Thale cress	cytosol	53.12	55.1
VIT_19s0014g00860.t01	Wine grape	cytosol	53.31	54.02
Zm00001d046304_P001	Maize	cytosol, plastid	70.7	53.81
KRH21202	Soybean	cytosol	54.63	53.52
KRH11072	Soybean	cytosol	54.06	52.96
VIT_10s0003g01800.t01	Wine grape	cytosol	51.98	52.38
Bra032337.1-P	Field mustard	cytosol	51.98	45.76
CDX99856	Canola	cytosol	52.36	43.76
CDY26313	Canola	cytosol	51.98	43.51
TraesCS2A01G168100.1	Wheat	cytosol	36.48	41.87
PGSC0003DMT400073054	Potato	cytosol	54.06	41.45
Solyc02g071980.2.1	Tomato	cytosol	53.69	41.16
TraesCS3A01G091400.1	Wheat	cytosol	36.86	39.47

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	InterPro:IPR013083
InterPro:IPR017455	PFAM:PF01363	PFAM:PF04366	PFscan:PS50178	PANTHER:PTHR15629	PANTHER:PTHR15629:SF9
SMART:SM00064	SUPFAM:SSF57903	EnsemblPlantsGene:TraesCS7A01G354900	EnsemblPlants:TraesCS7A01G354900.1	InterPro:Ysc84_actin-binding	InterPro:Znf_FYVE
InterPro:Znf_FYVE-rel	InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	TIGR:cd11526	SEG:seg	:

Description

No Description!

Coordinates

chr7A:-:519169130..519173937

Molecular Weight (calculated)

57239.7 Da

IEP (calculated)

4.931

GRAVY (calculated)

-0.219

Length

529 amino acids

Sequence
(BLAST)

001: MEGADHLYPS IEPYDLAPPQ LDDDATAAGG GGEARVCDPP VRWDEEPKEG THICEQGVKD DPEENDTEDH LSVVNIYESD DEMITLKESG ENVHSDCPLR
101: QQTGIWVPPS VPPMTKHDHE EWQKGFVSNA GYFVEDEYKW DIDEDIREMT MWDVFAEMAV AGKDKLLSVA SYDFGRHSMS LVSHFLLQAA LEDNSQTLAE
201: ASVGSEHALL ETEPTKWLPD SAAPSCMLCG ARFHPVICSR HHCRFCGGIF CGGCSKGRSL MPPKFGTSDP QRVCDVCGVR LECIQPYLMS QISRACQLPT
301: KDLTDLSTLR SWLNLPWAPT MEYEIYKAAN SIHGYCKVGK LNPEKSIPDS ILRQAKGLAI ITVVKVGMMV TYKIGTGLVI ARRADGSWSP PSAISTCGVG
401: YGAQAGAELA DFIIVLRNTD AIKTFSGNAH LSLGAGFGAS AGHLGRVAEA DFRAGDGGYA ACYTYSCSKG AFVGCALNGS VVSTRNNENA RFYGGPVKAS
501: EILLGSLAKP PAAATLYKAL STLFDRIGK

Best Arabidopsis Sequence Match ( AT1G29800.2 )
(BLAST)

001: MDERDREIRA SHGDSNAGNV VSQSIENTRE EDSGSCEGFV EESKRLEPEQ QKHGKYFFYD TPLSEETGVW IPVSVPPMLE PDHEEWSRGL SFNGGYFPEG
101: DMGWDQIFDE DKELTMWDVI VDMLLAARGK ASALSSGNLE RCGINFLSGH LLEQAWQDMA HTLTEANFGN AREILETEPP KWLPDSAASA CMLCSVRFHP
201: IMCSRHHCRY CGGIFCRDCS KGKSLVPVKF RVSDPQRVCD VCFVRLESVQ PYLMDQVSPA AQLPTHDLTD LSTLRSWVNF PWGQSMEYEI YKATNTLRGY
301: ITKVGSSRTE RSIPDAILRQ AKGLAVITVA RVGVMVTYKI GTGLVVARRD DGSWSPPSAI SSFGLGWGAQ AGGEFIDFII VLRTREAIQT FGSNTHLVVG
401: AGLSAAVGVT GRAVEADIRA GSGGYAACYT YSCSKGAFVG CSLEGSIFTT RTSENSRFYG SQSLAASDIL LGSLPRPPAA AALYRALGDL YQKMGR

Arabidopsis Description

RING/FYVE/PHD-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q84WW7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.