Factsheet for TraesCS7B01G272800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G367900.1	Wheat	cytosol	98.48	98.11
TraesCS7A01G354900.1	Wheat	cytosol	95.45	95.09
HORVU7Hr1G088960.1	Barley	endoplasmic reticulum	91.27	79.24
EER89914	Sorghum	cytosol	73.43	72.47
Os06t0552400-02	Rice	cytosol	74.57	71.58
GSMUA_Achr5P06610_001	Banana	cytosol	55.6	60.91
GSMUA_Achr7P13820_001	Banana	cytosol	57.5	57.82
AT1G29800.1	Thale cress	cytosol	53.51	55.29
VIT_19s0014g00860.t01	Wine grape	cytosol	54.27	54.79
KRH21202	Soybean	cytosol	55.41	54.07
Zm00001d046304_P001	Maize	cytosol, plastid	70.59	53.53
KRH11072	Soybean	cytosol	54.65	53.33
VIT_10s0003g01800.t01	Wine grape	cytosol	52.56	52.76
Bra032337.1-P	Field mustard	cytosol	52.37	45.92
CDX99856	Canola	cytosol	52.75	43.92
CDY26313	Canola	cytosol	52.37	43.67
TraesCS2B01G194100.1	Wheat	cytosol	37.19	42.52
PGSC0003DMT400073054	Potato	cytosol	54.27	41.45
Solyc02g071980.2.1	Tomato	cytosol	53.89	41.16
TraesCS3B01G106600.1	Wheat	cytosol	37.57	39.92

Protein Annotations

EnsemblPlants:TraesCS7B01G272800.1	EnsemblPlantsGene:TraesCS7B01G272800	Gene3D:3.30.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872
InterPro:IPR013083	InterPro:IPR017455	InterPro:Ysc84_actin-binding	InterPro:Znf_FYVE	InterPro:Znf_FYVE-rel	InterPro:Znf_FYVE_PHD
InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR15629	PANTHER:PTHR15629:SF9	PFAM:PF01363	PFAM:PF04366	PFscan:PS50178
SEG:seg	SMART:SM00064	SUPFAM:SSF57903	TIGR:cd11526	MapMan:35.2	:

Description

No Description!

Coordinates

chr7B:+:500724209..500728209

Molecular Weight (calculated)

57308.9 Da

IEP (calculated)

5.062

GRAVY (calculated)

-0.252

Length

527 amino acids

Sequence
(BLAST)

001: MEAPDRLYPS VEPYDLEPPQ LDDDAAVGTG EARVCDPPVR WDEEPKEGTH VCEQGAKDNP DRDDMEDHLS VVNIYESDDE MTTFKGSGEN IHSDCPLRQQ
101: TGIWVPPSVP PMTKHDHEEW QKGFVSNAGY FIEDEYKWDM DEDIREMTMW DVFAEMAVAG KDKLLSVASY DFGRHSMSLV SHFLLQAALE DNSQTLAEAS
201: VGSEHALLET EPTKWLPDSA APSCMLCGAR FHPVICSRHH CRFCGGIFCG SCSKGRSLMP PKFGTSDPQR VCDVCGVRLE CIQPYLMNQI SRACQLPTKD
301: LTDLSTLRSW LNLPWAPTME YEIYKAANSI HGYCKVGKLN PEKSIPDSIL RQAKGLAIIT VVKVGMMVTY KIGTGLVIAR RADGSWSPPS AISTCGVGYG
401: AQAGAELADF IIVLRNTDAI KTFSGNAHLS LGAGFGASAG HLGRVAEADF RAGDGGYAAC YTYSCSKGAF VGCALNGSVV STRNNENARF YGGPVKASEI
501: LLGSLPKPPA AATLYKALST LFDKIGK

Best Arabidopsis Sequence Match ( AT1G29800.2 )
(BLAST)

001: MDERDREIRA SHGDSNAGNV VSQSIENTRE EDSGSCEGFV EESKRLEPEQ QKHGKYFFYD TPLSEETGVW IPVSVPPMLE PDHEEWSRGL SFNGGYFPEG
101: DMGWDQIFDE DKELTMWDVI VDMLLAARGK ASALSSGNLE RCGINFLSGH LLEQAWQDMA HTLTEANFGN AREILETEPP KWLPDSAASA CMLCSVRFHP
201: IMCSRHHCRY CGGIFCRDCS KGKSLVPVKF RVSDPQRVCD VCFVRLESVQ PYLMDQVSPA AQLPTHDLTD LSTLRSWVNF PWGQSMEYEI YKATNTLRGY
301: ITKVGSSRTE RSIPDAILRQ AKGLAVITVA RVGVMVTYKI GTGLVVARRD DGSWSPPSAI SSFGLGWGAQ AGGEFIDFII VLRTREAIQT FGSNTHLVVG
401: AGLSAAVGVT GRAVEADIRA GSGGYAACYT YSCSKGAFVG CSLEGSIFTT RTSENSRFYG SQSLAASDIL LGSLPRPPAA AALYRALGDL YQKMGR

Arabidopsis Description

RING/FYVE/PHD-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q84WW7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.