CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032337.1-P	Field mustard	cytosol	95.09	100.0
AT1G29800.1	Thale cress	cytosol	68.51	84.9
CDX99856	Canola	cytosol	84.02	83.89
GSMUA_Achr5P06610_001	Banana	cytosol	50.63	66.53
VIT_10s0003g01800.t01	Wine grape	cytosol	53.48	64.38
KRH21202	Soybean	cytosol	53.48	62.59
GSMUA_Achr7P13820_001	Banana	cytosol	51.11	61.64
KRH11072	Soybean	cytosol	52.37	61.3
Zm00001d053541_P002	Maize	cytosol	45.25	54.89
EES04807	Sorghum	cytosol	45.57	54.14
Zm00001d016234_P001	Maize	cytosol	44.94	53.28
TraesCS7D01G367900.1	Wheat	cytosol	43.99	52.55
TraesCS7B01G272800.1	Wheat	cytosol	43.67	52.37
TraesCS7A01G354900.1	Wheat	cytosol	43.51	51.98
Os02t0233100-01	Rice	cytosol	43.35	51.22
EER89914	Sorghum	cytosol	42.88	50.75
Os06t0552400-02	Rice	cytosol	43.51	50.09
Solyc02g071980.2.1	Tomato	cytosol	53.48	48.99
PGSC0003DMT400073054	Potato	cytosol	52.69	48.26
HORVU7Hr1G088960.1	Barley	endoplasmic reticulum	44.3	46.13
Zm00001d046304_P001	Maize	cytosol, plastid	43.35	39.42
CDY30955	Canola	cytosol	31.17	34.5
CDY44837	Canola	cytosol	32.28	34.11

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.2	GO:A0A078GNT4	UniProt:A0A078GNT4	EnsemblPlants:CDY26313	ProteinID:CDY26313
ProteinID:CDY26313.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00035014001	InterPro:IPR013083
InterPro:IPR017455	PFAM:PF01363	PFAM:PF04366	PFscan:PS50178	PANTHER:PTHR15629	PANTHER:PTHR15629:SF9
SMART:SM00064	SUPFAM:SSF57903	UniParc:UPI0004EEC716	InterPro:Ysc84_actin-binding	InterPro:Znf_FYVE	InterPro:Znf_FYVE-rel
InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

BnaA09g26640DBnaA09g26640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNT4]

Coordinates

chrLK032187:-:481393..484347

Molecular Weight (calculated)

69948.4 Da

IEP (calculated)

5.343

GRAVY (calculated)

-0.399

Length

632 amino acids

Sequence
(BLAST)

001: MRKVLTCNRF PLDEVACLCL LRRKEGSNLK KMDKGVHGDA DAGNVVRQRI RETKEEEDST LDEGFVDESK RLEPDHQNMK LQMDDSVRDH HGDSDAGNVV
101: SQSIRETIQE HYTLREDDSK RLESDYQNLK LGMDVNLGDS NAGNVASQTI REARQEDSTL RKDESNKLEP DQQKRGKYFF YDTPLSEETG VWIPVSVPPM
201: LEPDHEEWSR GLSFNGGYFP EGEMGWNQIL DEDKELTMWD VIVDMLLAAR GKATALTSGN LESGISFFAG QHLLEQAWQE MAHTLTEANF GNAREILETE
301: PPKWLPDSAA SACMLCSVRF HPIMCSRHHC RYCGGLFCRD CSRGRSLLPV KFRVSDPQRV CDVCFVRLET VQPYLMDQVS PAAQLPTHDL TDLSTLRSWV
401: NFPWGQSMEY EIYKATNTIR GYISKVGSSR TERSIPDAIL RQAKGLAVIT VARVGVMVTY RIGTGLVVAR RDDGSWSPPS AISSFGLGWG AQAGGEFIDF
501: IIVLRTREAI RTFGSNTHFV VGAGLSAAVG VTGRAVEADI RAGSGGYAAC YTYSCSKGAF VGCSLEGSIF TTRTSENSRF YGSQSLAASD ILLGSLPKPP
601: AAAPLYRALG DLFQKMGSET TRSSTTSSFS ED

Best Arabidopsis Sequence Match ( AT1G29800.1 )
(BLAST)

001: MDERDREIRA SHGDSNAGNV VSQSIENTRE EDSGSCEGFV EESKRLEPEQ QKHGKYFFYD TPLSEETGVW IPVSVPPMLE PDHEEWSRGL SFNGGYFPEG
101: DMGWDQIFDE DKELTMWDVI VDMLLAARGK ASALSSGNLE RCGINFLSGH LLEQAWQDMA HTLTEANFGN AREILETEPP KWLPDSAASA CMLCSVRFHP
201: IMCSRHHCRY CGGIFCRDCS KGKSLVPVKF RVSDPQRVCD VCFVRLESVQ PYLMDQVSPA AQLPTHDLTD LSTLRSWVNF PWGQSMEYEI YKATNTLRGY
301: ITKVGSSRTE RSIPDAILRQ AKGLAVITVA RVGVMVTYKI GTGLVVARRD DGSWSPPSAI SSFGLGWGAQ AGGEFIDFII VLRTREAIQT FGSNTHLVVG
401: AGLSAAVGVT GRAVEADIRA GSGGYAACYT YSCSKGAFVG CSLEGSIFTT RTSENSRFYG SQSLAASDIL LGSLPRPPAA AALYRALGDL YQKMGSETVR
501: SPAISPLSED

Arabidopsis Description

RING/FYVE/PHD-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q84WW7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.