Factsheet for Os02t0233100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04807	Sorghum	cytosol	71.78	72.18
Zm00001d053541_P002	Maize	cytosol	68.41	70.25
Zm00001d016234_P001	Maize	cytosol	69.16	69.42
Os06t0552400-02	Rice	cytosol	64.67	63.02
GSMUA_Achr5P06610_001	Banana	cytosol	55.51	61.75
GSMUA_Achr7P13820_001	Banana	cytosol	57.01	58.21
VIT_19s0014g00860.t01	Wine grape	cytosol	54.58	55.94
AT1G29800.1	Thale cress	cytosol	52.34	54.9
KRH21202	Soybean	cytosol	55.14	54.63
KRH11072	Soybean	cytosol	54.02	53.52
VIT_10s0003g01800.t01	Wine grape	cytosol	51.4	52.38
Bra032337.1-P	Field mustard	cytosol	51.22	45.59
CDX99856	Canola	cytosol	52.34	44.23
CDY26313	Canola	cytosol	51.22	43.35
Os07t0616900-01	Rice	cytosol	36.82	42.64
PGSC0003DMT400073054	Potato	cytosol	54.39	42.17
Solyc02g071980.2.1	Tomato	cytosol	54.39	42.17
Os07t0272400-01	Rice	cytosol	37.2	40.04

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.2	EntrezGene:4328815	EMBL:AK121278	ProteinID:BAD27717.1	ProteinID:BAF08290.1
ProteinID:BAS77795.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0032587
GO:GO:0035091	GO:GO:0046872	GO:GO:1900027	InterPro:IPR013083	InterPro:IPR017455	EnsemblPlantsGene:Os02g0233100
EnsemblPlants:Os02t0233100-01	PFAM:PF01363	PFAM:PF04366	PFscan:PS50178	PANTHER:PTHR15629	PANTHER:PTHR15629:SF13
UniProt:Q6EUF2	SMART:SM00064	SUPFAM:SSF57903	UniParc:UPI00003CE4C1	RefSeq:XP_015623159.1	InterPro:Ysc84_actin-binding
InterPro:Znf_FYVE	InterPro:Znf_FYVE-rel	InterPro:Znf_FYVE_PHD	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0233100-01)

Coordinates

chr2:+:7542597..7547070

Molecular Weight (calculated)

58125.6 Da

IEP (calculated)

5.075

GRAVY (calculated)

-0.313

Length

535 amino acids

Sequence
(BLAST)

001: MAGAERPYYP PRPTDGGSGQ PAGCDSPMRW DDDDEDHGGG GGDGMTAVAG FNLFEEESDD PPAKNGVVDD PDTTTTSDCN TDMSEDLVKR EEGMNFHCDP
101: PLHEHTGIWV PVSVPPMTKR DHEEWHKGFG HNGDYFPEDE FNWEIDEENK EMTMWDVFSE MVVAAKDKVI SVASYDLGRR GMSMLSKFFF QEAWKDMAQT
201: LADANAGIAN ELLETERTIW LPDSAASACM LCNVRFHPIM CSRHHCRFCG GVFCGGCSKG RSLMPPKFNT SEPQRVCDVC GVRLESIQPY LINRISRASQ
301: PPTHDVTDLS TLRSWLNFPY AHTMEYEIYK AANSLNSYCK VGRLKPEKAI PYTILKQAKG LAIITVAKVG MMVAYKVGTG LVIARRADGS WSPPSAIATC
401: GIGYGAQAGG ELADFIIVLR NTEAVKTFSG KAHLSVGAGV SASVGHVGRV AEADFRAGDG GYAACYTYSC SKGAFVGCAL NGSLVSTRDT ENARFYGGPI
501: KAPDILMGSM ARPPAAAALY KVLSELFDNP EKQSL

Best Arabidopsis Sequence Match ( AT1G29800.1 )
(BLAST)

001: MDERDREIRA SHGDSNAGNV VSQSIENTRE EDSGSCEGFV EESKRLEPEQ QKHGKYFFYD TPLSEETGVW IPVSVPPMLE PDHEEWSRGL SFNGGYFPEG
101: DMGWDQIFDE DKELTMWDVI VDMLLAARGK ASALSSGNLE RCGINFLSGH LLEQAWQDMA HTLTEANFGN AREILETEPP KWLPDSAASA CMLCSVRFHP
201: IMCSRHHCRY CGGIFCRDCS KGKSLVPVKF RVSDPQRVCD VCFVRLESVQ PYLMDQVSPA AQLPTHDLTD LSTLRSWVNF PWGQSMEYEI YKATNTLRGY
301: ITKVGSSRTE RSIPDAILRQ AKGLAVITVA RVGVMVTYKI GTGLVVARRD DGSWSPPSAI SSFGLGWGAQ AGGEFIDFII VLRTREAIQT FGSNTHLVVG
401: AGLSAAVGVT GRAVEADIRA GSGGYAACYT YSCSKGAFVG CSLEGSIFTT RTSENSRFYG SQSLAASDIL LGSLPRPPAA AALYRALGDL YQKMGSETVR
501: SPAISPLSED

Arabidopsis Description

RING/FYVE/PHD-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q84WW7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.